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Gm29396 Pseudogene Detail
Summary
  • Symbol
    Gm29396
  • Name
    predicted gene 29396
  • Feature Type
    pseudogene
  • IDs
    MGI:5580102
    NCBI Gene: 115487214
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:92573996-92574809 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5580102
 pseudogene Chr9:92573996-92574957 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014215
 pseudogene Chr9:93745685-93746498 (+)
A/J MGP_AJ_G0014232
 pseudogene Chr9:90494159-90494972 (+)
AKR/J MGP_AKRJ_G0014158
 pseudogene Chr9:92622635-92623448 (+)
BALB/cJ MGP_BALBcJ_G0014182
 pseudogene Chr9:90141271-90142084 (+)
C3H/HeJ MGP_C3HHeJ_G0014014
 pseudogene Chr9:93079911-93080724 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014632
 pseudogene Chr9:96371936-96372749 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0013668
 pseudogene Chr9:92811539-92812287 (+)
CBA/J MGP_CBAJ_G0013996
 pseudogene Chr9:99717550-99718363 (+)
DBA/2J MGP_DBA2J_G0014080
 pseudogene Chr9:90011740-90012553 (+)
FVB/NJ MGP_FVBNJ_G0014077
 pseudogene Chr9:88963395-88964210 (+)
LP/J MGP_LPJ_G0014165
 pseudogene Chr9:93944562-93945375 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0014112
 pseudogene Chr9:101669972-101670785 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014603
 pseudogene Chr9:92861462-92862241 (+)
PWK/PhJ MGP_PWKPhJ_G0013482
 pseudogene Chr9:90168867-90169634 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013271
 pseudogene Chr9:92932074-92932865 (+)
WSB/EiJ MGP_WSBEiJ_G0013727
 pseudogene Chr9:92747876-92748703 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101822 Ensembl Gene Model | MGI Sequence Detail 814 C57BL/6J ±  kb
transcript ENSMUST00000185659 Ensembl | MGI Sequence Detail 716 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory