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Mir6397 Gene Detail
Summary
  • Symbol
    Mir6397
  • Name
    microRNA 6397
  • Synonyms
    mmu-mir-6397
Location &
Maps
more
  • Sequence Map
    Chr4:107944554-107944646 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5531386
 miRNA gene Chr4:107944554-107944646 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008744
 miRNA gene Chr4:108807357-108807449 (+)
A/J MGP_AJ_G0008728
 miRNA gene Chr4:104897826-104897918 (+)
AKR/J MGP_AKRJ_G0008720
 miRNA gene Chr4:107480775-107480867 (+)
BALB/cJ MGP_BALBcJ_G0008718
 miRNA gene Chr4:105100406-105100498 (+)
C3H/HeJ MGP_C3HHeJ_G0008658
 miRNA gene Chr4:108219317-108219409 (+)
C57BL/6NJ MGP_C57BL6NJ_G0008937
 miRNA gene Chr4:112710719-112710811 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007884
 miRNA gene Chr4:100197894-100197986 (+)
CAST/EiJ MGP_CASTEiJ_G0008500
 miRNA gene Chr4:106061843-106061935 (+)
CBA/J MGP_CBAJ_G0008624
 miRNA gene Chr4:116367816-116367908 (+)
DBA/2J MGP_DBA2J_G0008654
 miRNA gene Chr4:104518496-104518588 (+)
FVB/NJ MGP_FVBNJ_G0008675
 miRNA gene Chr4:103388605-103388697 (+)
LP/J MGP_LPJ_G0008749
 miRNA gene Chr4:109004190-109004282 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008640
 miRNA gene Chr4:121614426-121614518 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008918
 miRNA gene Chr4:107725025-107725117 (+)
PWK/PhJ MGP_PWKPhJ_G0008429
 miRNA gene Chr4:102779713-102779805 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008281
 miRNA gene Chr4:105092077-105092169 (+)
WSB/EiJ MGP_WSBEiJ_G0008597
 miRNA gene Chr4:107907650-107907742 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Mir6397
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102465213 NCBI Gene Model | MGI Sequence Detail 93 C57BL/6J ±  kb
transcript NR_105823 RefSeq | MGI Sequence Detail 93 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0021933
References
more
  • Summaries
    All 10
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory