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Gm27027 Gene Detail
Summary
  • Symbol
    Gm27027
  • Name
    predicted gene, 27027
  • Feature Type
    protein coding gene
  • IDs
    MGI:5504142
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:93787162-93826699 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    295 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5504142
 protein coding gene Chr2:93787162-93826699 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026182
 protein coding gene Chr2:95478188-95518470 (-)
A/J MGP_AJ_G0026143
 protein coding gene Chr2:91597667-91633183 (-)
AKR/J MGP_AKRJ_G0026124
 protein coding gene Chr2:94173887-94210628 (-)
BALB/cJ MGP_BALBcJ_G0026152
 protein coding gene Chr2:91791516-91829499 (-)
C3H/HeJ MGP_C3HHeJ_G0025903
 protein coding gene Chr2:94445453-94481455 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026603
 protein coding gene Chr2:98730228-98768550 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023994
 protein coding gene Chr2:88078407-88114062 (-)
CAST/EiJ MGP_CASTEiJ_G0025368
 protein coding gene Chr2:95048847-95084473 (-)
CBA/J MGP_CBAJ_G0025881
 protein coding gene Chr2:102175007-102215781 (-)
DBA/2J MGP_DBA2J_G0026017
 protein coding gene Chr2:91203203-91241182 (-)
FVB/NJ MGP_FVBNJ_G0025980
 protein coding gene Chr2:90326144-90361012 (-)
LP/J MGP_LPJ_G0026121
 protein coding gene Chr2:95672960-95708968 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026006
 protein coding gene Chr2:105070402-105106668 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026657
 protein coding gene Chr2:94248059-94285580 (-)
PWK/PhJ MGP_PWKPhJ_G0025103
 protein coding gene Chr2:90957793-90991567 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024904
 protein coding gene Chr2:93811905-93850025 (-)
WSB/EiJ MGP_WSBEiJ_G0025435
 protein coding gene Chr2:94870278-94906190 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Gm27027
  • Find Mice (IMSR)
    1 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098004 Ensembl Gene Model | MGI Sequence Detail 39538 C57BL/6J ±  kb
transcript ENSMUST00000183110 Ensembl | MGI Sequence Detail 547 Not Applicable  
polypeptide ENSMUSP00000138281 Ensembl | MGI Sequence Detail 97 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032854 Alkylated DNA repair protein alkB homologue 3
    IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
    IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
    IPR005123 Oxoglutarate/iron-dependent dioxygenase
References
more
  • Summaries
    All 8
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory