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Gene Expression Data
Assay Details
Assay
Reference: J:183075 Nichol PF, et al., Retinaldehyde dehydrogenase 2 is Down-Regulated During Duodenal Atresia Formation in Fgfr2IIIb-/- Mice. J Surg Res. 2012 Jun 1;175(1):82-7
Assay type: RNA in situ
MGI Accession ID: MGI:5427091
Gene symbol: Aldh1a2
Gene name: aldehyde dehydrogenase family 1, subfamily A2
Probe: Raldh2 probe6
Probe preparation: Antisense
Results
Specimen 2A: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: duodenum caudal part Strong Non-Uniform 2A Robustly expressed in the proximal intestine, with diminishing intensity distally.
TS18: duodenum rostral part Strong Non-Uniform 2A Robustly expressed in the proximal intestine, with diminishing intensity distally.
TS18: midgut loop Absent 2A No expression in the early cecum.
TS18: hindgut Absent 2A No expression in the early colon.

Specimen 2B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: duodenum caudal part mesoduodenum Strong Regionally restricted 2B Expression was limited to the mesoderm, with equal intensity both in the proximal and distal duodenum.
TS19: duodenum rostral part mesenchyme Strong Regionally restricted 2B Expression was limited to the mesoderm, with equal intensity both in the proximal and distal duodenum.

Specimen 3A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: duodenum caudal part Strong 3A Robust expression both in the proximal and distal duodenum.
TS19: duodenum rostral part Strong 3A Robust expression both in the proximal and distal duodenum.

Specimen 3B: embryonic day 11.5; Fgfr2tm1.1Dsn/Fgfr2tm1.1Dsn (more )
Structure Level Pattern Image Note
TS19: duodenum rostral part Present 3B Reduced expression in the proximal duodenum.
TS19: duodenum caudal part Strong 3B Robust expression in the distal duodenum.

Specimen 4A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: duodenum caudal part Strong 4A Robust expression both in the proximal and distal duodenum.
TS20: duodenum rostral part Strong 4A Robust expression both in the proximal and distal duodenum.

Specimen 4B: embryonic day 12.5; Fgfr2tm1.1Dsn/Fgfr2tm1.1Dsn (more )
Structure Level Pattern Image Note
TS20: duodenum caudal part Present Regionally restricted 4B Reduced expression in the very focal within the proximal duodenum where the atresia was forming. Reduced overall expression in the proximal intestine, compared with the wild type.
TS20: duodenum rostral part Present Regionally restricted 4B Reduced expression in the very focal within the proximal duodenum where the atresia was forming. Reduced overall expression in the proximal intestine, compared with the wild type.

Specimen 4C: embryonic day 12.5; Fgfr2tm1.1Dsn/Fgfr2tm1.1Dsn (more )
Structure Level Pattern Image Note
TS20: duodenum caudal part Present Regionally restricted 4C Reduced expression in both the proximal and distal duodenum, compared with the wild type. Expression was uniform when no atresia formed. Expression was restricted to the mesenteric side. Little or no expression within the antimesenteric mesoderm.
TS20: duodenum rostral part Present Regionally restricted 4C Reduced expression in both the proximal and distal duodenum, compared with the wild type. Expression was uniform when no atresia formed. Expression was restricted to the mesenteric side. Little or no expression within the antimesenteric mesoderm.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory