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Gene Expression Data
Assay Details
Assay
Reference: J:142567 Capellini TD, et al., Conservation of notochord gene expression across chordates: insights from the Leprecan gene family. Genesis. 2008 Nov;46(11):683-96
Assay type: RNA in situ
MGI Accession ID: MGI:5295408
Gene symbol: P3h1
Gene name: prolyl 3-hydroxylase 1
Probe: Lepre1 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen S1: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube floor plate Present S1_d
TS17: notochord Present S1_d

Specimen 3a: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: notochord Weak 3a
TS15: otocyst Weak 3a There is weak expression in the otic capsule.
TS15: head Weak 3a There is weak expression in craniofacial tissues.
TS15: forelimb bud Absent 3a There is little to no expression.
TS15: trunk paraxial mesenchyme Absent 3a There is little to no expression.

Specimen 3b: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: notochord Weak 3b
TS15: otocyst Weak 3b There is weak expression in the otic capsule.
TS15: head Weak 3b There is weak expression in craniofacial tissues.
TS15: forelimb bud Absent 3b There is little to no expression.
TS15: trunk paraxial mesenchyme Absent 3b There is little to no expression.

Specimen 3d: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial arch Present 3d Expression is present in craniofacial/branchial arch tissues.
TS17: head Present 3d Expression is present in craniofacial/branchial arch tissues.
TS17: otocyst Present 3d Expression is present in the otic capsule.
TS17: paraxial mesenchyme Present 3d
TS17: hindlimb bud Present 3d
TS17: forelimb bud Absent 3d

Specimen 3e/f: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: notochord Present 3e , 3f

Specimen 3g: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindlimb bud Present 3g

Specimen 3i: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: head Present 3i Expression is waning in craniofacial tissues.
TS19: inner ear Present 3i Expression is present in the otic capsule.
TS19: hindlimb bud Present 3i Expression is waning.
TS19: paraxial mesenchyme Present 3i Expression is waning.

Specimen 3j/k: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: notochord Absent 3k , 3j Expression is absent from domains adjacent and/or anterior to the forelimb.

Specimen 3l/m: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: notochord Present Regionally restricted 3m , 3l Expression is present in rostral domains.

Specimen 6a' E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: notochord Present 6a' Leprecan E10.5 Inset shows higher magnification of staining in the notochord.

Specimen 6a' E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: notochord Present 6a' Leprecan E11.5

Specimen 6a' E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: notochord Present 6a' Leprecan E12.5

Specimen 6a' E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: embryo Present Regionally restricted 6a' Leprecan E13.5 Expression is present in the notochord.
TS21: vertebral cartilage condensation Present Regionally restricted 6a' Leprecan E13.5 Expression is present in the neural arches and laminae of the developing vertebrae.

Specimen 6b'a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb pre-cartilage condensation Present 6b'a
TS20: humerus pre-cartilage condensation Present 6b'a

Specimen 6b'b: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: femur pre-cartilage condensation Present 6b'b
TS20: hindlimb pre-cartilage condensation Present 6b'b

Specimen 6b'c: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: vertebral pre-cartilage condensation Present 6b'c Expression is present in the vertebral mesenchyme.

Specimen 6b'd: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: forelimb pre-cartilage condensation Present 6b'd
TS21: humerus cartilage condensation Present 6b'd

Specimen 6b'e: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: femur cartilage condensation Present Regionally restricted 6b'e Expression is present in the proximal femur.
TS21: pelvic girdle skeleton Present 6b'e

Specimen 6b'f: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: vertebral cartilage condensation Present Regionally restricted 6b'f Expression is present in the centrum, the transverse processes, and laminae.

Specimen 6b'g: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: vertebral cartilage condensation Present Regionally restricted 6b'g Expression is present in the neural arches.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/09/2024
MGI 6.23
The Jackson Laboratory