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Trav12-4 Pseudogene Detail
Summary
  • Symbol
    Trav12-4
  • Name
    T cell receptor alpha variable 12-4
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:5009956
    NCBI Gene: 100101936
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr14:54016060-54016302 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5009956
 pseudogenic gene segment Chr14:54016060-54016330 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002619
 pseudogenic gene segment Chr14:47677218-47677479 (+)
A/J MGP_AJ_G0002591
 pseudogenic gene segment Chr14:46782166-46782427 (+)
AKR/J MGP_AKRJ_G0002576
 pseudogenic gene segment Chr14:48473207-48473468 (+)
BALB/cJ MGP_BALBcJ_G0002579
 pseudogenic gene segment Chr14:46757185-46757446 (+)
C3H/HeJ MGP_C3HHeJ_G0002542
 pseudogenic gene segment Chr14:48142104-48142365 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002722
 pseudogenic gene segment Chr14:50136195-50136465 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002273
 pseudogenic gene segment Chr14:45227528-45227798 (+)
CAST/EiJ MGP_CASTEiJ_G0002518
 pseudogenic gene segment Chr14:44401110-44401380 (+)
CBA/J MGP_CBAJ_G0002538
 pseudogenic gene segment Chr14:51586623-51586884 (+)
DBA/2J MGP_DBA2J_G0002541
 pseudogenic gene segment Chr14:46516891-46517152 (+)
FVB/NJ MGP_FVBNJ_G0002569
 pseudogenic gene segment Chr14:45998565-45998826 (+)
LP/J MGP_LPJ_G0002621
 pseudogenic gene segment Chr14:48711309-48711570 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002551
 pseudogenic gene segment Chr14:51047477-51047738 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002732
 pseudogenic gene segment Chr14:47662436-47662697 (+)
PWK/PhJ MGP_PWKPhJ_G0002475
 pseudogenic gene segment Chr14:43059331-43059592 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002425
 pseudogenic gene segment Chr14:43637679-43637922 (+)
WSB/EiJ MGP_WSBEiJ_G0002546
 pseudogenic gene segment Chr14:47972754-47973024 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100101936 NCBI Gene Model | MGI Sequence Detail 243 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory