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Pate1 Gene Detail
Summary
  • Symbol
    Pate1
  • Name
    prostate and testis expressed 1
  • Synonyms
    Gm17252
  • Feature Type
    protein coding gene
  • IDs
    MGI:4936886
    NCBI Gene: 100312987
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:35596375-35598686 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4936886
 protein coding gene Chr9:35596182-35598686 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034542
 protein coding gene Chr9:33498276-33500586 (-)
A/J MGP_AJ_G0034520
 protein coding gene Chr9:32643901-32646211 (-)
AKR/J MGP_AKRJ_G0034446
 protein coding gene Chr9:33364484-33366796 (-)
BALB/cJ MGP_BALBcJ_G0034511
 protein coding gene Chr9:32546493-32548803 (-)
C3H/HeJ MGP_C3HHeJ_G0034223
 protein coding gene Chr9:33700713-33703023 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035032
 protein coding gene Chr9:34626973-34629284 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031962
 protein coding gene Chr9:31308018-31310325 (-)
CAST/EiJ MGP_CASTEiJ_G0033546
 protein coding gene Chr9:33605518-33607825 (-)
CBA/J MGP_CBAJ_G0034197
 protein coding gene Chr9:35779510-35781831 (-)
DBA/2J MGP_DBA2J_G0034354
 protein coding gene Chr9:32614503-32616814 (-)
FVB/NJ MGP_FVBNJ_G0034297
 protein coding gene Chr9:32035065-32037375 (-)
LP/J MGP_LPJ_G0034440
 protein coding gene Chr9:33747126-33749438 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034341
 protein coding gene Chr9:37360176-37362487 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035052
 protein coding gene Chr9:33321345-33323657 (-)
PWK/PhJ MGP_PWKPhJ_G0033251
 protein coding gene Chr9:32597059-32599366 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033086
 protein coding gene Chr9:33596198-33598520 (-)
WSB/EiJ MGP_WSBEiJ_G0033661
 protein coding gene Chr9:33099481-33101783 (-)



Homology
more
  • Human Ortholog
    PATE1, prostate and testis expressed 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PATE1, prostate and testis expressed 1
  • Synonyms
    PATE
  • Links
    NCBI Gene ID: 160065
    neXtProt AC: NX_Q8WXA2
    UniProt: Q8WXA2

  • Chr Location
    11q24.2; chr11:125746279-125749867 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotype references
Male mice exhibit normal spermatozoa and fecundity.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091215 Ensembl Gene Model | MGI Sequence Detail 2312 C57BL/6J ±  kb
transcript ENSMUST00000170021 Ensembl | MGI Sequence Detail 389 Not Applicable  
polypeptide ENSMUSP00000130484 Ensembl | MGI Sequence Detail 125 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:138601 Levitin F, et al., PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity. J Biol Chem. 2008 Jun 13;283(24):16928-39
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory