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Igkv1-35 Gene Detail
Summary
  • Symbol
    Igkv1-35
  • Name
    immunoglobulin kappa variable 1-35
  • Synonyms
    Gm16688
Location &
Maps
more
  • Sequence Map
    Chr6:69987933-69988657 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439612
 gene segment Chr6:69987933-69988657 (-)
129S1/SvImJ ENSMUSG00200013871
 gene segment Chr6:66894421-66895145 (-)
A/J ENSMUSG00195045974
 gene segment Chr6:66652905-66653629 (-)
AKR/J ENSMUSG00220045086
 gene segment Chr6:65723535-65724259 (-)
BALB/cJ ENSMUSG00180043554
 gene segment Chr6:67008786-67009510 (-)
C3H/HeJ ENSMUSG00175013107
 gene segment Chr6:110446353-110447077 (+)
C57BL/6NJ ENSMUSG00215043579
 gene segment Chr6:66977788-66978512 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000077
 gene segment Chr6:67134961-67135685 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210042392
 gene segment Chr6:66800600-66801324 (-)
DBA/2J ENSMUSG00185045037
 gene segment Chr6:67365813-67366537 (-)
FVB/NJ ENSMUSG00205043537
 gene segment Chr6:66349835-66350559 (-)
JF1/MsJ ENSUMUG00000046262
 gene segment Chr6:66445540-66446264 (-)
LP/J ENSMUSG00230028880
 gene segment Chr6:68486097-68486821 (-)
NOD/ShiLtJ ENSMUSG00190039170
 gene segment Chr6:66386260-66386984 (-)
NZO/HlLtJ ENSMUSG00225020526
 gene segment Chr6:70459962-70460686 (-)
PWK/PhJ ENSLUMG00010023731
 gene segment Chr6:65787374-65788098 (-)
SPRET/EiJ ENSMSPG00010027727
 gene segment Chr6:67826611-67827336 (-)
WSB/EiJ ENSIUOG00005026402
 gene segment Chr6:67647500-67648225 (-)



Homology
more
  • Human Ortholog
    IGKV2-24, immunoglobulin kappa variable 2-24
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGKV2-24, immunoglobulin kappa variable 2-24
  • Synonyms
    A23, IGKV224
  • Links
    NCBI Gene ID: 28923
    UniProt: A0A0C4DH68

  • Chr Location
    2p11.2; chr2:89176328-89177160 (-)  GRCh38
  • Human Ortholog
    IGKV2-30, immunoglobulin kappa variable 2-30
  • Synonyms
    A17, IGKV230
  • Links
    NCBI Gene ID: 28919
    UniProt: P06310

  • Chr Location
    2p11.2; chr2:89244781-89245596 (-)  GRCh38
  • Human Ortholog
    IGKV2D-24, immunoglobulin kappa variable 2D-24 (non-functional)
  • Synonyms
    A7, IGKV2D24
  • Links
    NCBI Gene ID: 28885
    UniProt: A0A075B6R9

  • Chr Location
    2p11.2; chr2:90004797-90005629 (+)  GRCh38
  • Human Ortholog
    IGKV2D-30, immunoglobulin kappa variable 2D-30
  • Synonyms
    A1, IGKV2D30
  • Links
    NCBI Gene ID: 28881
    UniProt: A0A075B6S6

  • Chr Location
    2p11.2; chr2:89936859-89937679 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 620105 NCBI Gene Model | MGI Sequence Detail 725 C57BL/6J ±  kb
polypeptide A0A0G2JDE5 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR050150 Immunoglobulin Variable Light Chain
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 7
    Gene Ontology 1
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory