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Gm16685 Gene Detail
Summary
  • Symbol
    Gm16685
  • Name
    predicted gene, 16685
  • Synonyms
    mNAIL, NAIL
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4439609
    NCBI Gene: 102634900
  • Alliance
  • Transcription Start Sites
    21 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:7677765-7755061 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 3, 2.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    430 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439609
lncRNA gene Chr3:7677765-7755061 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003719
antisense lncRNA gene Chr3:4444757-4517515 (+)
A/J MGP_AJ_G0003700
antisense lncRNA gene Chr3:4715296-4792136 (+)
AKR/J MGP_AKRJ_G0003678
antisense lncRNA gene Chr3:4510365-4601482 (+)
BALB/cJ MGP_BALBcJ_G0003689
antisense lncRNA gene Chr3:4428741-4516333 (+)
C3H/HeJ MGP_C3HHeJ_G0003636
antisense lncRNA gene Chr3:4808231-4893317 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003828
antisense lncRNA gene Chr3:4985475-5068936 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003333
antisense lncRNA gene Chr3:3772617-3850814 (+)
CAST/EiJ MGP_CASTEiJ_G0003599
antisense lncRNA gene Chr3:4804186-4893384 (+)
CBA/J MGP_CBAJ_G0003633
antisense lncRNA gene Chr3:4805441-4905215 (+)
DBA/2J MGP_DBA2J_G0003640
antisense lncRNA gene Chr3:4307553-4383558 (+)
FVB/NJ MGP_FVBNJ_G0003662
antisense lncRNA gene Chr3:4168101-4245940 (+)
LP/J MGP_LPJ_G0003719
antisense lncRNA gene Chr3:4935705-5019480 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003650
antisense lncRNA gene Chr3:5849672-5949050 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003829
antisense lncRNA gene Chr3:4377621-4457016 (+)
PWK/PhJ MGP_PWKPhJ_G0003555
antisense lncRNA gene Chr3:4484236-4565857 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003497
antisense lncRNA gene Chr3:4500124-4592335 (+)
WSB/EiJ MGP_WSBEiJ_G0003634
antisense lncRNA gene Chr3:4383248-4466909 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous knockout reduces susceptibility to induced colitis.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 102634900 NCBI Gene Model | MGI Sequence Detail 77297 C57BL/6J ±  kb
transcript NR_168341 RefSeq | MGI Sequence Detail 1592 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:303079 Akincilar SC, et al., NAIL: an evolutionarily conserved lncRNA essential for licensing coordinated activation of p38 and NFkappaB in colitis. Gut. 2020 Nov 25;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory