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Traj33 Gene Detail
Summary
  • Symbol
    Traj33
  • Name
    T cell receptor alpha joining 33
  • Synonyms
    Gm16666
Location &
Maps
more
  • Sequence Map
    Chr14:54422815-54422871 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439590
 gene segment Chr14:54422815-54422871 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002457
 gene segment Chr14:48113765-48113821 (+)
A/J MGP_AJ_G0002431
 gene segment Chr14:47205654-47205710 (+)
AKR/J MGP_AKRJ_G0002417
 gene segment Chr14:48913080-48913136 (+)
BALB/cJ MGP_BALBcJ_G0002425
 gene segment Chr14:47174076-47174132 (+)
C3H/HeJ MGP_C3HHeJ_G0002404
 gene segment Chr14:48595155-48595211 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002552
 gene segment Chr14:50579219-50579275 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002151
 gene segment Chr14:45618477-45618533 (+)
CAST/EiJ MGP_CASTEiJ_G0002366
 gene segment Chr14:44826863-44826919 (+)
CBA/J MGP_CBAJ_G0002395
 gene segment Chr14:52069850-52069906 (+)
DBA/2J MGP_DBA2J_G0002400
 gene segment Chr14:46949401-46949457 (+)
FVB/NJ MGP_FVBNJ_G0002414
 gene segment Chr14:46404157-46404213 (+)
LP/J MGP_LPJ_G0002454
 gene segment Chr14:49138808-49138864 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002384
 gene segment Chr14:51513995-51514051 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002547
 gene segment Chr14:48096426-48096482 (+)
PWK/PhJ MGP_PWKPhJ_G0002327
 gene segment Chr14:43472895-43472951 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002279
 gene segment Chr14:44071991-44072047 (+)
WSB/EiJ MGP_WSBEiJ_G0002393
 gene segment Chr14:48386335-48386391 (+)



Homology
more
  • Human Ortholog
    TRAJ33, T cell receptor alpha joining 33
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAJ33, T cell receptor alpha joining 33
  • Links
    NCBI Gene ID: 28722

  • Chr Location
    14q11.2; chr14:22508602-22508658 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    2 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mcie homozygous for a knock-out allele exhibit reduced mucosal-associated invariant T cells.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100124356 NCBI Gene Model | MGI Sequence Detail 57 C57BL/6J ±  kb
polypeptide A0A0G2JDY8 UniProt | EBI | MGI Sequence Detail 19 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:101719 Khor B, et al., Chromosomal excision of TCRdelta chain genes is dispensable for alphabeta T cell lineage commitment. Int Immunol. 2005 Mar;17(3):225-32
  • Latest
    J:276912 Koay HF, et al., Diverse MR1-restricted T cells in mice and humans. Nat Commun. 2019 May 21;10(1):2243
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory