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Snord57 Gene Detail
Summary
  • Symbol
    Snord57
  • Name
    small nucleolar RNA, C/D box 57
  • Synonyms
    MBII-434, U57
Location &
Maps
more
  • Sequence Map
    Chr2:130119946-130120008 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 63.20 cM
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819544
 snoRNA gene Chr2:130119936-130120008 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039040
 snoRNA gene Chr2:133726755-133726826 (+)
A/J MGP_AJ_G0039036
 snoRNA gene Chr2:128316932-128317003 (+)
AKR/J MGP_AKRJ_G0038969
 snoRNA gene Chr2:131997744-131997815 (+)
BALB/cJ MGP_BALBcJ_G0039019
 snoRNA gene Chr2:128674258-128674329 (+)
C3H/HeJ MGP_C3HHeJ_G0038682
 snoRNA gene Chr2:132451799-132451870 (+)
C57BL/6NJ MGP_C57BL6NJ_G0039569
 snoRNA gene Chr2:137868243-137868314 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036286
 snoRNA gene Chr2:123061092-123061163 (+)
CAST/EiJ MGP_CASTEiJ_G0037823
 snoRNA gene Chr2:132701797-132701868 (+)
CBA/J MGP_CBAJ_G0038653
 snoRNA gene Chr2:142974279-142974350 (+)
DBA/2J MGP_DBA2J_G0038842
 snoRNA gene Chr2:127704909-127704980 (+)
FVB/NJ MGP_FVBNJ_G0038794
 snoRNA gene Chr2:126326685-126326756 (+)
LP/J MGP_LPJ_G0038881
 snoRNA gene Chr2:133986506-133986577 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0038795
 snoRNA gene Chr2:146824956-146825027 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0039669
 snoRNA gene Chr2:131971378-131971449 (+)
PWK/PhJ MGP_PWKPhJ_G0037507
 snoRNA gene Chr2:127258818-127258889 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037260
 snoRNA gene Chr2:131089557-131089628 (+)
WSB/EiJ MGP_WSBEiJ_G0038050
 snoRNA gene Chr2:132896192-132896263 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100217428 NCBI Gene Model | MGI Sequence Detail 63 C57BL/6J ±  kb
transcript NR_028528 RefSeq | MGI Sequence Detail 63 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 7
    Developmental Gene Expression 1
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
  • Latest
    J:237822 Lee J, et al., Rpl13a small nucleolar RNAs regulate systemic glucose metabolism. J Clin Invest. 2016 Dec 01;126(12):4616-4625
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory