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Ccdc142os Gene Detail
Summary
  • Symbol
    Ccdc142os
  • Name
    coiled-coil domain containing 142, opposite strand
  • Synonyms
    Gm15605
Location &
Maps
more
  • Sequence Map
    Chr6:83083589-83086035 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 35.94 cM
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3783052
 antisense lncRNA gene Chr6:83083589-83086035 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004296
 antisense lncRNA gene Chr6:84114048-84116494 (-)
A/J MGP_AJ_G0004273
 antisense lncRNA gene Chr6:80897766-80900212 (-)
AKR/J MGP_AKRJ_G0004255
 antisense lncRNA gene Chr6:83226199-83228645 (-)
BALB/cJ MGP_BALBcJ_G0004260
 antisense lncRNA gene Chr6:80910648-80913094 (-)
C3H/HeJ MGP_C3HHeJ_G0004245
 antisense lncRNA gene Chr6:101152178-101154624 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004409
 antisense lncRNA gene Chr6:86397267-86399713 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003882
 antisense lncRNA gene Chr6:79256359-79258812 (-)
CAST/EiJ MGP_CASTEiJ_G0004170
 antisense lncRNA gene Chr6:83235620-83238066 (-)
CBA/J MGP_CBAJ_G0004202
 antisense lncRNA gene Chr6:89808575-89811021 (-)
DBA/2J MGP_DBA2J_G0004218
 antisense lncRNA gene Chr6:80217778-80220224 (-)
FVB/NJ MGP_FVBNJ_G0004234
 antisense lncRNA gene Chr6:79424921-79427367 (-)
LP/J MGP_LPJ_G0004297
 antisense lncRNA gene Chr6:84106131-84108577 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004224
 antisense lncRNA gene Chr6:94126483-94128929 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004407
 antisense lncRNA gene Chr6:83043242-83045687 (-)
PWK/PhJ MGP_PWKPhJ_G0004123
 antisense lncRNA gene Chr6:79111114-79113557 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004067
 antisense lncRNA gene Chr6:81890009-81892458 (-)
WSB/EiJ MGP_WSBEiJ_G0004206
 antisense lncRNA gene Chr6:83480457-83482903 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087578 Ensembl Gene Model | MGI Sequence Detail 2447 C57BL/6J ±  kb
transcript ENSMUST00000125657 Ensembl | MGI Sequence Detail 891 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 14
    Phenotypes 8
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory