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Gm3443 Pseudogene Detail
Summary
  • Symbol
    Gm3443
  • Name
    predicted gene 3443
Location &
Maps
more
  • Sequence Map
    Chr19:21530305-21535021 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 15.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3781620
 pseudogene Chr19:21529597-21535231 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024978
 protein coding gene Chr19:19594334-19596317 (+)
A/J MGP_AJ_G0024955
 protein coding gene Chr19:18539108-18541092 (+)
AKR/J MGP_AKRJ_G0024925
 protein coding gene Chr19:19234237-19236220 (+)
BALB/cJ MGP_BALBcJ_G0024954
 protein coding gene Chr19:18536059-18538042 (+)
C3H/HeJ MGP_C3HHeJ_G0024712
 protein coding gene Chr19:19190724-19192707 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025396
 protein coding gene Chr19:20266297-20268280 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022815
 protein coding gene Chr19:18763022-18765078 (+)
CAST/EiJ MGP_CASTEiJ_G0024180
 protein coding gene Chr19:18870439-18872412 (+)
CBA/J MGP_CBAJ_G0024690
 protein coding gene Chr19:21097634-21099617 (+)
DBA/2J MGP_DBA2J_G0024822
 protein coding gene Chr19:18542291-18544274 (+)
FVB/NJ MGP_FVBNJ_G0024783
 protein coding gene Chr19:18400829-18402813 (+)
LP/J MGP_LPJ_G0024906
 protein coding gene Chr19:19557745-19559728 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024810
 protein coding gene Chr19:21224169-21226152 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025451
 protein coding gene Chr19:19176092-19178014 (+)
PWK/PhJ MGP_PWKPhJ_G0023929
 protein coding gene Chr19:18087001-18088938 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023734
 protein coding gene Chr19:18466996-18469000 (+)
WSB/EiJ MGP_WSBEiJ_G0024248
 protein coding gene Chr19:19269380-19271368 (+)



Homology
more
  • Human Ortholog
    C9orf57, chromosome 9 open reading frame 57
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C9orf57, chromosome 9 open reading frame 57
  • Links
    NCBI Gene ID: 138240
    neXtProt AC: NX_Q5W0N0
    UniProt: Q5W0N0

  • Chr Location
    9q21.13; chr9:72051376-72072721 (-)  GRCh38
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079382 Ensembl Gene Model | MGI Sequence Detail 4717 C57BL/6J ±  kb
transcript ENSMUST00000112772 Ensembl | MGI Sequence Detail 328 Not Applicable  
polypeptide XP_036017632 RefSeq | MGI Sequence Detail 117 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory