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Gm9843 Pseudogene Detail
Summary
  • Symbol
    Gm9843
  • Name
    predicted gene 9843
  • Feature Type
    pseudogene
  • IDs
    MGI:3708621
    NCBI Gene: 100039316
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:76200139-76200540 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 43.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3708621
 pseudogene Chr16:76200094-76200599 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024740
 protein coding gene Chr19:3087170-3088736 (+)
A/J MGP_AJ_G0024706
 protein coding gene Chr19:2914690-2916470 (+)
AKR/J MGP_AKRJ_G0024679
 protein coding gene Chr19:3006011-3007515 (+)
BALB/cJ MGP_BALBcJ_G0024706
 protein coding gene Chr19:2909934-2911502 (+)
C3H/HeJ MGP_C3HHeJ_G0024474
 protein coding gene Chr19:3023736-3025304 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0022586
 protein coding gene Chr19:2844177-2845951 (+)
CAST/EiJ MGP_CASTEiJ_G0023946
 protein coding gene Chr19:3031205-3032773 (+)
CBA/J MGP_CBAJ_G0024446
 protein coding gene Chr19:3294649-3296425 (+)
DBA/2J MGP_DBA2J_G0024573
 protein coding gene Chr19:2901813-2903584 (+)
FVB/NJ MGP_FVBNJ_G0024539
 protein coding gene Chr19:2915397-2918559 (+)
LP/J MGP_LPJ_G0024659
 protein coding gene Chr19:3065387-3066953 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022785
 protein coding gene Chr16:85397039-85397542 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023392
 protein coding gene Chr16:75638415-75638918 (-)
PWK/PhJ MGP_PWKPhJ_G0023692
 protein coding gene Chr19:2934154-2935721 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023497
 protein coding gene Chr19:2994766-2996333 (+)
WSB/EiJ MGP_WSBEiJ_G0024008
 protein coding gene Chr19:3042738-3044306 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050299 Ensembl Gene Model | MGI Sequence Detail 402 C57BL/6J ±  kb
transcript ENSMUST00000052867 Ensembl | MGI Sequence Detail 402 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 12
    Diseases 1
    Phenotypes 8
  • Earliest
    J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
  • Latest
    J:339533 Duchon A, et al., Multi-influential genetic interactions alter behaviour and cognition through six main biological cascades in Down syndrome mouse models. Hum Mol Genet. 2021 May 28;30(9):771-788
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory