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Rpl39-ps Pseudogene Detail
Summary
  • Symbol
    Rpl39-ps
  • Name
    ribosomal protein L39, pseudogene
  • Synonyms
    ENSMUSG00000036305, Gm15430
  • Feature Type
    pseudogene
  • IDs
    MGI:3705781
    NCBI Gene: 100503815
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:102543473-102543623 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 57.75 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3705781
 pseudogene Chr15:102543417-102543775 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039691
 pseudogene Chr2:50701947-50702301 (-)
A/J MGP_AJ_G0039670
 pseudogene Chr15:100699307-100699661 (+)
AKR/J MGP_AKRJ_G0039615
 pseudogene Chr2:50155045-50155399 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0039321
 pseudogene Chr2:50140461-50140815 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040198
 pseudogene Chr15:108731267-108731621 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036922
 pseudogene ChrX:30057046-30057401 (-)
CAST/EiJ MGP_CASTEiJ_G0038513
 pseudogene ChrX:20239345-20239700 (-)
CBA/J MGP_CBAJ_G0039292
 pseudogene Chr2:54149779-54150133 (-)
DBA/2J MGP_DBA2J_G0039467
 pseudogene Chr15:99981674-99982028 (+)
FVB/NJ MGP_FVBNJ_G0039444
 pseudogene Chr2:48100160-48100514 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0039428
 pseudogene Chr15:116091845-116092199 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040303
 pseudogene Chr15:103797969-103798323 (+)
PWK/PhJ MGP_PWKPhJ_G0038190
 pseudogene ChrX:19703745-19704439 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037936
 pseudogene ChrX:20723637-20723989 (-)
WSB/EiJ MGP_WSBEiJ_G0038659
 pseudogene Chr15:104417357-104417711 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Rpl39-ps
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036305 Ensembl Gene Model | MGI Sequence Detail 151 C57BL/6J ±  kb
transcript ENSMUST00000146505 Ensembl | MGI Sequence Detail 151 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3704460
References
more
  • Summaries
    All 26
    Diseases 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory