About   Help   FAQ
Gm10509 Pseudogene Detail
Summary
  • Symbol
    Gm10509
  • Name
    predicted gene 10509
Location &
Maps
more
  • Sequence Map
    Chr17:21898792-21911448 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 11.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    486 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3796835
 pseudogene Chr17:21898710-21911950 (+)
129S1/SvImJ ENSMUSG00200038245
 pseudogene Chr17:17447917-17448758 (+)
A/J ENSMUSG00195038411
 pseudogene Chr17:18312219-18313060 (+)
AKR/J ENSMUSG00220028766
 pseudogene Chr17:17533050-17533891 (+)
BALB/cJ ENSMUSG00180018472
 pseudogene Chr17:17602463-17603304 (+)
C3H/HeJ ENSMUSG00175045654
 pseudogene Chr17:17418256-17419097 (+)
C57BL/6NJ ENSMUSG00215042989
 pseudogene Chr17:17401697-17402538 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021129
 protein coding gene Chr17:16990164-16990422 (+)
CAST/EiJ ENSTCUG00005023796
 pseudogene Chr17:17954768-17955609 (+)
CBA/J ENSMUSG00210041691
 pseudogene Chr17:17185226-17186067 (+)
DBA/2J ENSMUSG00185040737
 pseudogene Chr17:19408684-19409525 (+)
FVB/NJ ENSMUSG00205035249
 pseudogene Chr17:17894749-17895590 (+)
JF1/MsJ ENSUMUG00000037282
 pseudogene Chr17:18571821-18572662 (+)
LP/J ENSMUSG00230055121
 pseudogene Chr17:20806633-20807474 (+)
NOD/ShiLtJ ENSMUSG00190043545
 pseudogene Chr17:17567743-17568584 (+)
NZO/HlLtJ ENSMUSG00225054762
 pseudogene Chr17:22729668-22730509 (+)
PWK/PhJ ENSLUMG00010021232
 pseudogene Chr17:16852149-16852990 (+)
SPRET/EiJ ENSMSPG00010042745
 pseudogene Chr17:18208238-18209079 (+)
WSB/EiJ ENSIUOG00005042978
 pseudogene Chr17:18152436-18153277 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    48
  • RefSeq
    2
  • UniProt
    6
Representative SequencesLengthStrain/SpeciesFlank
genomic 100310809 NCBI Gene Model | MGI Sequence Detail 12657 C57BL/6J ±  kb
transcript NM_001354753 RefSeq | MGI Sequence Detail 2954 C57BL/6  
polypeptide NP_001341682 RefSeq | MGI Sequence Detail 723 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR050636 C2H2-type zinc finger domain-containing protein
    IPR001909 Krueppel-associated box
    IPR036051 Krueppel-associated box domain superfamily
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:3704470
References
more
  • Summaries
    All 28
    Gene Ontology 3
    Phenotypes 16
  • Earliest
    J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
  • Latest
    J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory