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Trav17 Gene Detail
Summary
  • Symbol
    Trav17
  • Name
    T cell receptor alpha variable 17
  • Synonyms
    OTTMUSG00000015028
  • Feature Type
    gene segment
  • IDs
    MGI:3702128
    NCBI Gene: 627777
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:54044096-54044572 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3702128
 gene segment Chr14:54044096-54044572 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002566
 gene segment Chr14:47715903-47716379 (+)
A/J MGP_AJ_G0002537
 gene segment Chr14:46823081-46823557 (+)
AKR/J MGP_AKRJ_G0002528
 gene segment Chr14:48506784-48507260 (+)
BALB/cJ MGP_BALBcJ_G0002523
 gene segment Chr14:46793956-46794432 (+)
C3H/HeJ MGP_C3HHeJ_G0002490
 gene segment Chr14:48188464-48188940 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002664
 gene segment Chr14:50165757-50166233 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002234
 gene segment Chr14:45259018-45259490 (+)
CAST/EiJ MGP_CASTEiJ_G0002476
 gene segment Chr14:44444151-44444627 (+)
CBA/J MGP_CBAJ_G0002489
 gene segment Chr14:51629960-51630436 (+)
DBA/2J MGP_DBA2J_G0002493
 gene segment Chr14:46549714-46550190 (+)
FVB/NJ MGP_FVBNJ_G0002521
 gene segment Chr14:46034070-46034546 (+)
LP/J MGP_LPJ_G0002572
 gene segment Chr14:48748687-48749163 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002496
 gene segment Chr14:51089396-51089872 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002674
 gene segment Chr14:47697926-47698402 (+)
PWK/PhJ MGP_PWKPhJ_G0002435
 gene segment Chr14:43096415-43096891 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002387
 gene segment Chr14:43677328-43677804 (+)
WSB/EiJ MGP_WSBEiJ_G0002491
 gene segment Chr14:48007671-48008147 (+)



Homology
more
  • Human Ortholog
    TRAV8-3, T cell receptor alpha variable 8-3
  • Vertebrate Orthologs
    15
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV8-3, T cell receptor alpha variable 8-3
  • Synonyms
    TCRAV1S4, TCRAV8S3, TRAV83
  • Links
    NCBI Gene ID: 28683
    UniProt: A0A0A6YYJ7

  • Chr Location
    14q11.2; chr14:21852558-21853006 (+)  GRCh38
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 627777 NCBI Gene Model | MGI Sequence Detail 477 C57BL/6J ±  kb
polypeptide A0A075B655 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 8
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory