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Cwc22rt4 Gene Detail
Summary
  • Symbol
    Cwc22rt4
  • Name
    CWC22 spliceosome-associated protein, retrotransposed 4
  • Synonyms
    Gm13696
Location &
Maps
more
  • Sequence Map
    Chr2:83803467-83805959 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.33 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    22
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3702068
 protein coding gene Chr2:83803379-83806432 (+)
129S1/SvImJ ENSMUSG00200003548
 protein coding gene Chr2:80837980-80838766 (+)
A/J ENSMUSG00195052770
 protein coding gene Chr2:80989291-80990077 (+)
A/J ENSMUSG00195052807
 protein coding gene Chr2:81000941-81001727 (+)
A/J ENSMUSG00195052797
 protein coding gene Chr2:80995116-80995902 (+)
AKR/J ENSMUSG00220001921
 protein coding gene Chr2:80879632-80880418 (+)
AKR/J ENSMUSG00220001920
 protein coding gene Chr2:80873807-80874593 (+)
AKR/J ENSMUSG00220001899
 protein coding gene Chr2:80867982-80868768 (+)
BALB/cJ ENSMUSG00180054459
 protein coding gene Chr2:80928803-80929589 (+)
BALB/cJ ENSMUSG00180054419
 protein coding gene Chr2:80917153-80917939 (+)
BALB/cJ ENSMUSG00180054457
 protein coding gene Chr2:80922978-80923764 (+)
C3H/HeJ no annotation
C57BL/6NJ ENSMUSG00215023852
 protein coding gene Chr2:80923039-80923825 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J ENSMUSG00185010517
 protein coding gene Chr2:80919243-80920029 (+)
DBA/2J ENSMUSG00185010521
 protein coding gene Chr2:80925068-80925854 (+)
DBA/2J ENSMUSG00185010504
 protein coding gene Chr2:80913418-80914204 (+)
FVB/NJ no annotation
JF1/MsJ no annotation
LP/J ENSMUSG00230038451
 protein coding gene Chr2:82657855-82658641 (+)
LP/J ENSMUSG00230038922
 protein coding gene Chr2:82663680-82664466 (+)
LP/J ENSMUSG00230038924
 protein coding gene Chr2:82669505-82670291 (+)
NOD/ShiLtJ ENSMUSG00190009841
 protein coding gene Chr2:80909211-80909997 (+)
NOD/ShiLtJ ENSMUSG00190009805
 protein coding gene Chr2:80897561-80898347 (+)
NOD/ShiLtJ ENSMUSG00190009839
 protein coding gene Chr2:80903386-80904172 (+)
NZO/HlLtJ ENSMUSG00225001693
 protein coding gene Chr2:90515887-90516673 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CWC22, CWC22 spliceosome associated protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CWC22, CWC22 spliceosome associated protein
  • Synonyms
    EIF4GL, fSAPb, NCM
  • Links
    NCBI Gene ID: 57703
    UniProt: Q9HCG8

  • Chr Location
    2q31.3; chr2:179944872-180007297 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096484 Ensembl Gene Model | MGI Sequence Detail 2493 C57BL/6J ±  kb
transcript ENSMUST00000180347 Ensembl | MGI Sequence Detail 2493 Not Applicable  
polypeptide ENSMUSP00000137022 Ensembl | MGI Sequence Detail 830 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:7466231
References
more
  • Summaries
    All 12
    Phenotypes 5
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory