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Sec61g-ps3 Pseudogene Detail
Summary
  • Symbol
    Sec61g-ps3
  • Name
    SEC61 translocon subunit gamma, pseudogene 3
  • Synonyms
    Gm12881
Location &
Maps
more
  • Sequence Map
    Chr4:120978071-120978493 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 56.80 cM
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651892
 pseudogene Chr4:120978071-120987410 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012857
 pseudogene Chr4:122438680-122439102 (-)
A/J MGP_AJ_G0012841
 pseudogene Chr4:117601402-117601824 (-)
AKR/J MGP_AKRJ_G0012811
 pseudogene Chr4:120198641-120199063 (-)
BALB/cJ MGP_BALBcJ_G0012821
 pseudogene Chr4:118215071-118215493 (-)
C3H/HeJ MGP_C3HHeJ_G0012679
 pseudogene Chr4:121717326-121717748 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013160
 pseudogene Chr4:127035605-127036027 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011414
 pseudogene Chr4:111633721-111634107 (-)
CAST/EiJ MGP_CASTEiJ_G0010811
 pseudogene Chr14:51278781-51278981 (+)
CBA/J MGP_CBAJ_G0012655
 pseudogene Chr4:130494124-130494546 (-)
DBA/2J MGP_DBA2J_G0012717
 pseudogene Chr4:118180038-118180460 (-)
FVB/NJ MGP_FVBNJ_G0012720
 pseudogene Chr4:116693020-116693442 (-)
LP/J MGP_LPJ_G0012793
 pseudogene Chr4:122560950-122561372 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012731
 pseudogene Chr4:135291849-135292271 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013172
 pseudogene Chr4:121262164-121262586 (-)
PWK/PhJ MGP_PWKPhJ_G0010682
 pseudogene Chr14:49652362-49652529 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010505
 pseudogene Chr14:50341942-50342109 (+)
WSB/EiJ MGP_WSBEiJ_G0012456
 pseudogene Chr4:121285036-121285458 (-)



Homology
more
  • Human Ortholog
    SEC61G, SEC61 translocon subunit gamma
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SEC61G, SEC61 translocon subunit gamma
  • Synonyms
    SSS1
  • Links
    NCBI Gene ID: 23480
    neXtProt AC: NX_P60059
    UniProt: P60059

  • Chr Location
    7p11.2; chr7:54752250-54759974 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Sec61g-ps3
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082891 Ensembl Gene Model | MGI Sequence Detail 423 C57BL/6J ±  kb
transcript ENSMUST00000121191 Ensembl | MGI Sequence Detail 203 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:164563 Mouse Genome Informatics Scientific Curators, Human to Mouse ISO GO annotation transfer. 2010 Oct;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory