About   Help   FAQ
Gm11878 Pseudogene Detail
Summary
  • Symbol
    Gm11878
  • Name
    predicted gene 11878
  • Feature Type
    pseudogene
  • IDs
    MGI:3651784
    NCBI Gene: 664911
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:22519628-22520027 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 9.73 cM
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651784
 pseudogene Chr4:22519613-22520097 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012552
 pseudogene Chr4:19592881-19593280 (+)
A/J MGP_AJ_G0011986
 pseudogene Chr3:888699-889097 (+)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0011841
 pseudogene Chr3:897294-897692 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012845
 pseudogene Chr4:20355793-20356192 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010253
 pseudogene Chr18:31905629-31906030 (+)
CAST/EiJ MGP_CASTEiJ_G0011622
 pseudogene Chr3:952651-953052 (+)
CBA/J MGP_CBAJ_G0012370
 pseudogene Chr4:20966895-20967294 (+)
DBA/2J MGP_DBA2J_G0011868
 pseudogene Chr3:530205-530603 (+)
FVB/NJ MGP_FVBNJ_G0011876
 pseudogene Chr3:506966-507364 (+)
LP/J MGP_LPJ_G0011937
 pseudogene Chr3:876277-876675 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011876
 pseudogene Chr3:895019-895417 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0012846
 pseudogene Chr4:19392662-19393060 (+)
PWK/PhJ MGP_PWKPhJ_G0011472
 pseudogene Chr3:857486-857884 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011288
 pseudogene Chr3:755841-756242 (+)
WSB/EiJ MGP_WSBEiJ_G0011644
 pseudogene Chr3:528730-529131 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081810 Ensembl Gene Model | MGI Sequence Detail 400 C57BL/6J ±  kb
transcript ENSMUST00000117908 Ensembl | MGI Sequence Detail 400 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory