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Spata31f1a Gene Detail
Summary
  • Symbol
    Spata31f1a
  • Name
    spermatogenesis associated 31 subfamily F member 1A
  • Synonyms
    Fam205a1, Gm12429
  • Feature Type
    protein coding gene
  • IDs
    MGI:3651059
    NCBI Gene: 433698
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:42848071-42853888 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 22.86 cM
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651059
 protein coding gene Chr4:42848067-42856138 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0028599
 protein coding gene Chr4:42150933-42155935 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    SPATA31F1, SPATA31 subfamily F member 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATA31F1, SPATA31 subfamily F member 1
  • Synonyms
    C9orf144B, FAM205A
  • Links
    NCBI Gene ID: 259308
    neXtProt AC: NX_Q6ZU69
    UniProt: Q6ZU69

  • Chr Location
    9p13.3; chr9:34723053-34729488 (-)  GRCh38
  • Human Ortholog
    SPATA31F2P, SPATA31 subfamily F member 2, pseudogene
  • Synonyms
    C9orf144, C9orf144A, FAM205B, FAM205BP
  • Links
    NCBI Gene ID: 389715

  • Chr Location
    9p13.3; chr9:34830267-34838586 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078721 Ensembl Gene Model | MGI Sequence Detail 5818 C57BL/6J ±  kb
transcript ENSMUST00000107979 Ensembl | MGI Sequence Detail 4146 Not Applicable  
polypeptide ENSMUSP00000103613 Ensembl | MGI Sequence Detail 1314 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 2
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory