About   Help   FAQ
Gm12854 Pseudogene Detail
Summary
  • Symbol
    Gm12854
  • Name
    predicted gene 12854
Location &
Maps
more
  • Sequence Map
    Chr4:115924465-115924761 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.10 cM
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650410
 pseudogene Chr4:115924379-115926099 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011421
 pseudogene Chr18:13648897-13655159 (-)
A/J MGP_AJ_G0012818
 pseudogene Chr4:112460760-112461056 (+)
AKR/J MGP_AKRJ_G0012788
 pseudogene Chr4:114870833-114871129 (+)
BALB/cJ MGP_BALBcJ_G0011394
 pseudogene Chr18:13265401-13265697 (-)
C3H/HeJ MGP_C3HHeJ_G0012655
 pseudogene Chr4:116451505-116451801 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0012632
 pseudogene Chr4:124762224-124762520 (+)
DBA/2J MGP_DBA2J_G0011311
 pseudogene Chr18:13124913-13125209 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0011381
 pseudogene Chr18:13747278-13748595 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm12854
  • Find Mice (IMSR)
    1 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    14
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078238 Ensembl Gene Model | MGI Sequence Detail 297 C57BL/6J ±  kb
transcript ENSMUST00000128518 Ensembl | MGI Sequence Detail 297 Not Applicable  
polypeptide XP_036020519 RefSeq | MGI Sequence Detail 119 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory