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Gm12830 Gene Detail
Summary
  • Symbol
    Gm12830
  • Name
    predicted gene 12830
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649998
    NCBI Gene: 433746
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:114678919-114713363 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 52.69 cM
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649998
 lncRNA gene Chr4:114678917-114713363 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028589
 protein coding gene Chr4:115571506-115609131 (+)
A/J MGP_AJ_G0028551
 protein coding gene Chr4:111164590-111199404 (+)
AKR/J MGP_AKRJ_G0028499
 protein coding gene Chr4:113465021-113500512 (+)
BALB/cJ MGP_BALBcJ_G0028571
 protein coding gene Chr4:111802454-111839405 (+)
C3H/HeJ MGP_C3HHeJ_G0028285
 protein coding gene Chr4:115080370-115114655 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029015
 protein coding gene Chr4:120046902-120085990 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027722
 protein coding gene Chr4:112499858-112534038 (+)
CBA/J MGP_CBAJ_G0028253
 protein coding gene Chr4:123157429-123196244 (+)
DBA/2J MGP_DBA2J_G0028402
 protein coding gene Chr4:111812274-111847929 (+)
FVB/NJ MGP_FVBNJ_G0028370
 protein coding gene Chr4:110277100-110313115 (+)
LP/J MGP_LPJ_G0028503
 protein coding gene Chr4:115778311-115816734 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028395
 protein coding gene Chr4:128303059-128339604 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029051
 protein coding gene Chr4:114709126-114745274 (+)
PWK/PhJ MGP_PWKPhJ_G0027447
 protein coding gene Chr4:108596480-108632009 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027271
 protein coding gene Chr4:111102693-111137188 (+)
WSB/EiJ MGP_WSBEiJ_G0027800
 protein coding gene Chr4:114493562-114531252 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055198 Ensembl Gene Model | MGI Sequence Detail 34445 C57BL/6J ±  kb
transcript ENSMUST00000137570 Ensembl | MGI Sequence Detail 2306 Not Applicable  
polypeptide Q8CAN6 UniProt | EBI | MGI Sequence Detail 157 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 17
    Phenotypes 7
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory