Gm13544 MGI Mouse Gene Detail - MGI:3649668

Sequence Map

Chr2:58166791-58176914 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649668	lncRNA gene	Chr2:58166791-58176914 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003564	antisense lncRNA gene	Chr2:57815951-57827948 (+)
A/J	MGP_AJ_G0003544	antisense lncRNA gene	Chr2:55590654-55600825 (+)
AKR/J	MGP_AKRJ_G0003523	antisense lncRNA gene	Chr2:57126833-57136914 (+)
BALB/cJ	MGP_BALBcJ_G0003533	antisense lncRNA gene	Chr2:55697990-55708225 (+)
C3H/HeJ	MGP_C3HHeJ_G0003481	antisense lncRNA gene	Chr2:57207880-57219229 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003671	antisense lncRNA gene	Chr2:59558002-59570079 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003181	antisense lncRNA gene	Chr2:53185445-53196285 (+)
CAST/EiJ	MGP_CASTEiJ_G0003444	antisense lncRNA gene	Chr2:57222662-57232675 (+)
CBA/J	MGP_CBAJ_G0003478	antisense lncRNA gene	Chr2:61773302-61785359 (+)
DBA/2J	MGP_DBA2J_G0003486	antisense lncRNA gene	Chr2:55211866-55221883 (+)
FVB/NJ	MGP_FVBNJ_G0003505	antisense lncRNA gene	Chr2:54740386-54750515 (+)
LP/J	MGP_LPJ_G0003559	antisense lncRNA gene	Chr2:57674093-57684705 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003493	antisense lncRNA gene	Chr2:63487842-63499828 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003674	antisense lncRNA gene	Chr2:57114445-57124453 (+)
PWK/PhJ	MGP_PWKPhJ_G0003399	antisense lncRNA gene	Chr2:55028008-55038494 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003344	antisense lncRNA gene	Chr2:57217142-57228272 (+)
WSB/EiJ	MGP_WSBEiJ_G0003479	antisense lncRNA gene	Chr2:57412182-57424039 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	100502932	NCBI Gene Model \| MGI Sequence Detail	10124	C57BL/6J	± kb
	transcript	NR_040365	RefSeq \| MGI Sequence Detail	2940	ZRU/MplStud

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Summaries

All 9

Phenotypes 2
Earliest

J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
Latest

J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/16/2024 MGI 6.23