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Gm13040 Gene Detail
Summary
  • Symbol
    Gm13040
  • Name
    predicted gene 13040
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649498
    NCBI Gene: 100040854
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:143253641-143260146 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.75 cM
Strain
Comparison
more
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649498
protein coding gene Chr4:143253632-143260148 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029083
protein coding gene Chr4:147712621-147722330 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0029002
protein coding gene Chr4:145397999-145426086 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0028788
protein coding gene Chr4:145839322-145859179 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029502
protein coding gene Chr4:152189631-152192352 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028753
protein coding gene Chr4:157461730-157470342 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028855
protein coding gene Chr4:140341315-140347480 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0028887
protein coding gene Chr4:160571389-160572623 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027759
protein coding gene Chr4:141158449-141164045 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070616 Ensembl Gene Model | MGI Sequence Detail 6506 C57BL/6J ±  kb
transcript ENSMUST00000094521 Ensembl | MGI Sequence Detail 2075 Not Applicable  
polypeptide ENSMUSP00000092098 Ensembl | MGI Sequence Detail 481 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME
Molecular
Reagents
less

  • Microarray probesets 3
References
more
  • Summaries
    All 13
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory