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Rpl13a-ps1 Pseudogene Detail
Summary
  • Symbol
    Rpl13a-ps1
  • Name
    ribosomal protein 13A, pseudogene 1
  • Synonyms
    Gm5520
  • Feature Type
    pseudogene
  • IDs
    MGI:3648883
    NCBI Gene: 433251
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:50018563-50019174 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 44.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648883
 pseudogene Chr19:50018539-50019195 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025239
 protein coding gene Chr19:50025429-50026040 (-)
A/J MGP_AJ_G0025215
 protein coding gene Chr19:47500725-47501336 (-)
AKR/J MGP_AKRJ_G0025184
 protein coding gene Chr19:49044967-49045578 (-)
BALB/cJ MGP_BALBcJ_G0025210
 protein coding gene Chr19:47576204-47576815 (-)
C3H/HeJ MGP_C3HHeJ_G0024970
 protein coding gene Chr19:49197111-49197722 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025653
 protein coding gene Chr19:51213982-51214593 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0024950
 protein coding gene Chr19:53773771-53774382 (-)
DBA/2J MGP_DBA2J_G0025082
 protein coding gene Chr19:47333207-47333818 (-)
FVB/NJ MGP_FVBNJ_G0025043
 protein coding gene Chr19:47088871-47089482 (-)
LP/J MGP_LPJ_G0025168
 protein coding gene Chr19:49890260-49890871 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025074
 protein coding gene Chr19:53066073-53066684 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025711
 protein coding gene Chr19:49182598-49183185 (-)
PWK/PhJ MGP_PWKPhJ_G0017971
 protein coding gene Chr11:85173114-85188410 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017763
 protein coding gene Chr11:87147344-87159990 (-)
WSB/EiJ MGP_WSBEiJ_G0024505
 protein coding gene Chr19:49313364-49314999 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000062083 Ensembl Gene Model | MGI Sequence Detail 612 C57BL/6J ±  kb
transcript ENSMUST00000071866 Ensembl | MGI Sequence Detail 612 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory