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Clec2j Gene Detail
Summary
  • Symbol
    Clec2j
  • Name
    C-type lectin domain family 2, member J
Location &
Maps
more
  • Sequence Map
    Chr6:128631869-128633990 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 63.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647940
 protein coding gene Chr6:128629379-128638783 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0040457
 pseudogene Chr6:127207780-127225687 (-)
AKR/J MGP_AKRJ_G0040384
 pseudogene Chr6:130638521-130647287 (-)
BALB/cJ MGP_BALBcJ_G0040463
 pseudogene Chr6:126809033-126820286 (-)
C3H/HeJ MGP_C3HHeJ_G0040083
 pseudogene Chr6:130807552-130817716 (-)
C57BL/6NJ MGP_C57BL6NJ_G0041080
 pseudogene Chr6:135723088-135736956 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028922
 pseudogene Chr6:124541924-125171675 (-)
CAST/EiJ MGP_CASTEiJ_G0039148
 pseudogene Chr6:131464223-131466132 (+)
CBA/J MGP_CBAJ_G0040056
 pseudogene Chr6:140987839-141002451 (-)
DBA/2J MGP_DBA2J_G0040256
 pseudogene Chr6:126128190-126136721 (-)
FVB/NJ MGP_FVBNJ_G0040205
 pseudogene Chr6:125026611-125039424 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0040197
 pseudogene Chr6:144812751-144822097 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0041158
 pseudogene Chr6:130655436-130664842 (-)
PWK/PhJ MGP_PWKPhJ_G0038829
 pseudogene Chr6:124825210-124827123 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0039390
 pseudogene Chr6:131060465-131068880 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 677440 NCBI Gene Model | MGI Sequence Detail 2122 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:108757 Carlyle JR, et al., Molecular and genetic basis for strain-dependent NK1.1 alloreactivity of mouse NK cells. J Immunol. 2006 Jun 15;176(12):7511-7524
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory