Gm7616 MGI Mouse Gene Detail - MGI:3647735

Sequence Map

Chr9:59858579-59859686 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647735	lncRNA gene	Chr9:59858568-59866327 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004636	antisense lncRNA gene	Chr9:59341329-59348976 (+)
A/J	MGP_AJ_G0004617	antisense lncRNA gene	Chr9:57434628-57442349 (+)
AKR/J	MGP_AKRJ_G0004600	antisense lncRNA gene	Chr9:58770013-58778971 (+)
BALB/cJ	MGP_BALBcJ_G0004601	antisense lncRNA gene	Chr9:57152584-57160290 (+)
C3H/HeJ	MGP_C3HHeJ_G0004550	antisense lncRNA gene	Chr9:59242649-59250341 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004751	antisense lncRNA gene	Chr9:60966053-60973493 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004202	antisense lncRNA gene	Chr9:57151215-57158743 (+)
CAST/EiJ	MGP_CASTEiJ_G0004508	antisense lncRNA gene	Chr9:59339731-59346956 (+)
CBA/J	MGP_CBAJ_G0004544	antisense lncRNA gene	Chr9:63124480-63132182 (+)
DBA/2J	MGP_DBA2J_G0004559	antisense lncRNA gene	Chr9:57239527-57247156 (+)
FVB/NJ	MGP_FVBNJ_G0004577	antisense lncRNA gene	Chr9:56508925-56518524 (+)
LP/J	MGP_LPJ_G0004640	antisense lncRNA gene	Chr9:59632118-59641134 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004565	antisense lncRNA gene	Chr9:64579520-64588138 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004750	antisense lncRNA gene	Chr9:58779956-58788592 (+)
PWK/PhJ	MGP_PWKPhJ_G0004461	antisense lncRNA gene	Chr9:57310384-57318125 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004401	antisense lncRNA gene	Chr9:59043813-59051428 (+)
WSB/EiJ	MGP_WSBEiJ_G0004549	antisense lncRNA gene	Chr9:58716108-58724806 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	665389	NCBI Gene Model \| MGI Sequence Detail	1108	C57BL/6J	± kb
	transcript	NR_168957	RefSeq \| MGI Sequence Detail	438	C57BL/6

Summaries

All 5
Earliest

J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
Latest

J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7616:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85480	Chr9:59858573-59858585 (+)	0 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/23/2024 MGI 6.23