Spata31d1b MGI Mouse Gene Detail - MGI:3646080 - spermatogenesis associated 31 subfamily D, member 1B

Sequence Map

Chr13:59860098-59867103 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646080	protein coding gene	Chr13:59860098-59867109 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020641	protein coding gene	Chr13:59423462-59431559 (+)
A/J	MGP_AJ_G0020596	protein coding gene	Chr13:57205697-57213983 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0020592	protein coding gene	Chr13:57468611-57475482 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0021026	protein coding gene	Chr13:61218509-61228941 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018608	protein coding gene	Chr13:55092731-55099835 (+)
CAST/EiJ	MGP_CASTEiJ_G0019907	protein coding gene	Chr13:58919901-58926486 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0020473	protein coding gene	Chr13:56748679-56757482 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0020549	protein coding gene	Chr13:59685389-59693737 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0021069	protein coding gene	Chr13:58525648-58531921 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0019967	protein coding gene	Chr13:58969493-58976009 (+)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	238662	NCBI Gene Model \| MGI Sequence Detail	7006	C57BL/6J	± kb
transcript	NM_001167593	RefSeq \| MGI Sequence Detail	4281	C57BL/6
polypeptide	NP_001161065	RefSeq \| MGI Sequence Detail	1361	C57BL/6

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Summaries

All 16

Phenotypes 5
Earliest

J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Spata31d1b:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr4094	Chr13:59860096-59860099 (+)	0 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/16/2024 MGI 6.23