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Igkv3-12-1 Pseudogene Detail
Summary
  • Symbol
    Igkv3-12-1
  • Name
    immunoglobulin kappa chain variable 3-12-1
  • Synonyms
    Gm8875
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:3645632
    NCBI Gene: 667908
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:70474665-70475257 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645632
 pseudogenic gene segment Chr6:70474646-70475326 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000289
 pseudogenic gene segment Chr6:70901407-70901708 (-)
A/J MGP_AJ_G0000262
 pseudogenic gene segment Chr6:68152251-68152809 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0000257
 pseudogenic gene segment Chr6:68220800-68221358 (-)
C3H/HeJ MGP_C3HHeJ_G0000209
 pseudogenic gene segment Chr6:114128402-114128994 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000379
 pseudogenic gene segment Chr6:72725910-72726502 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000249
 pseudogenic gene segment Chr6:70064298-70064599 (-)
CBA/J MGP_CBAJ_G0000248
 pseudogenic gene segment Chr6:75576252-75576844 (-)
DBA/2J MGP_DBA2J_G0000246
 pseudogenic gene segment Chr6:67561961-67562553 (-)
FVB/NJ MGP_FVBNJ_G0000251
 pseudogenic gene segment Chr6:66936490-66937082 (-)
LP/J MGP_LPJ_G0000300
 pseudogenic gene segment Chr6:70760957-70761258 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000259
 pseudogenic gene segment Chr6:79209441-79210033 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000356
 pseudogenic gene segment Chr6:69961422-69962014 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0000251
 pseudogenic gene segment Chr6:70291314-70291615 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105862 Ensembl Gene Model | MGI Sequence Detail 593 C57BL/6J ±  kb
transcript ENSMUST00000197093 Ensembl | MGI Sequence Detail 351 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory