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Gm5843 Pseudogene Detail
Summary
  • Symbol
    Gm5843
  • Name
    predicted gene 5843
  • Feature Type
    pseudogene
  • IDs
    MGI:3645250
    NCBI Gene: 545507
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:14787475-14794078 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 3.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645250
 pseudogene Chr3:14787475-14794686 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040288
 pseudogene Chr3:11908983-11917019 (-)
A/J MGP_AJ_G0040267
 pseudogene Chr3:11825845-11835484 (+)
AKR/J MGP_AKRJ_G0040204
 pseudogene Chr3:11850131-11867246 (-)
BALB/cJ MGP_BALBcJ_G0040269
 pseudogene Chr3:11632751-11636698 (-)
C3H/HeJ MGP_C3HHeJ_G0039904
 pseudogene Chr3:12178965-12187000 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040860
 pseudogene Chr3:12709711-12720243 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037288
 pseudogene Chr3:10135620-10147095 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039870
 pseudogene Chr3:12915427-12925631 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0040024
 pseudogene Chr3:11214372-11230997 (+)
LP/J MGP_LPJ_G0040116
 pseudogene Chr3:12489748-12520744 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040020
 pseudogene Chr3:14673188-14695826 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040959
 pseudogene Chr3:11619537-11630749 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0038376
 pseudogene Chr3:11715381-11719891 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 545507 NCBI Gene Model | MGI Sequence Detail 6604 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory