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Gm5558 Pseudogene Detail
Summary
  • Symbol
    Gm5558
  • Name
    predicted gene 5558
  • Feature Type
    pseudogene
  • IDs
    MGI:3644616
    NCBI Gene: 433914
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:91954438-91954932 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 45.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644616
 pseudogene Chr5:91954232-91954975 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013180
 pseudogene Chr5:92931728-92932222 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0013132
 pseudogene Chr5:92168282-92168776 (-)
BALB/cJ MGP_BALBcJ_G0013145
 pseudogene Chr5:90147703-90148197 (-)
C3H/HeJ MGP_C3HHeJ_G0012992
 pseudogene Chr5:92569922-92570416 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013507
 pseudogene Chr5:96642049-96642543 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0012964
 pseudogene Chr5:99945310-99945804 (-)
DBA/2J MGP_DBA2J_G0013044
 pseudogene Chr5:89310071-89310565 (-)
FVB/NJ MGP_FVBNJ_G0013047
 pseudogene Chr5:88159773-88160267 (-)
LP/J MGP_LPJ_G0013633
 pseudogene Chr6:126540250-126540752 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013065
 pseudogene Chr5:104916618-104917112 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013510
 pseudogene Chr5:91712262-91712756 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Gm5558
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096726 Ensembl Gene Model | MGI Sequence Detail 495 C57BL/6J ±  kb
transcript ENSMUST00000178933 Ensembl | MGI Sequence Detail 495 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 12
    Phenotypes 8
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory