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Gm5828 Pseudogene Detail
Summary
  • Symbol
    Gm5828
  • Name
    predicted gene 5828
  • Feature Type
    pseudogene
  • IDs
    MGI:3644176
    NCBI Gene: 545306
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:16838503-16840362 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 5.11 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644176
 pseudogene Chr1:16838503-16840362 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010011
 pseudogene Chr1:14294484-14296343 (-)
A/J MGP_AJ_G0009992
 pseudogene Chr1:14102031-14103890 (-)
AKR/J MGP_AKRJ_G0009975
 pseudogene Chr1:14125559-14127418 (-)
BALB/cJ MGP_BALBcJ_G0009981
 pseudogene Chr1:13827191-13829050 (-)
C3H/HeJ MGP_C3HHeJ_G0009912
 pseudogene Chr1:14153411-14155621 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010230
 pseudogene Chr1:14912934-14915726 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009944
 pseudogene Chr14:44302849-44316308 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0009886
 pseudogene Chr1:15248738-15250597 (-)
DBA/2J MGP_DBA2J_G0009908
 pseudogene Chr1:13703633-13706408 (-)
FVB/NJ MGP_FVBNJ_G0009934
 pseudogene Chr1:13476742-13478601 (-)
LP/J MGP_LPJ_G0010002
 pseudogene Chr1:14493254-14495093 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0009894
 pseudogene Chr1:15862121-15876205 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010205
 pseudogene Chr1:14084262-14086121 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0009483
 pseudogene Chr1:14284678-14286456 (-)
WSB/EiJ MGP_WSBEiJ_G0009822
 pseudogene Chr1:14019571-14028851 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 545306 NCBI Gene Model | MGI Sequence Detail 1860 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory