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Gm5436 Pseudogene Detail
Summary
  • Symbol
    Gm5436
  • Name
    predicted pseudogene 5436
  • Feature Type
    pseudogene
  • IDs
    MGI:3643291
    NCBI Gene: 432676
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:84305105-84305747 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 39.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643291
 pseudogene Chr12:84305051-84305763 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010928
 pseudogene Chr12:84953927-84954568 (-)
A/J MGP_AJ_G0010935
 pseudogene Chr12:81737685-81738422 (-)
AKR/J MGP_AKRJ_G0010888
 pseudogene Chr12:83947457-83948330 (-)
BALB/cJ MGP_BALBcJ_G0010908
 pseudogene Chr12:82068942-82069583 (-)
C3H/HeJ MGP_C3HHeJ_G0010804
 pseudogene Chr12:84423405-84424046 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011179
 pseudogene Chr12:87391280-87391921 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0010779
 pseudogene Chr12:90759910-90760551 (-)
DBA/2J MGP_DBA2J_G0010826
 pseudogene Chr12:81271509-81272150 (-)
FVB/NJ MGP_FVBNJ_G0010839
 pseudogene Chr12:80224112-80224753 (-)
LP/J MGP_LPJ_G0010910
 pseudogene Chr12:84829161-84829802 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010820
 pseudogene Chr12:93689814-93690455 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011164
 pseudogene Chr12:83548500-83549141 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0010339
 pseudogene Chr12:78031953-78032589 (-)
WSB/EiJ MGP_WSBEiJ_G0010681
 pseudogene Chr12:84261958-84262599 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042962 Ensembl Gene Model | MGI Sequence Detail 643 C57BL/6J ±  kb
transcript ENSMUST00000058103 Ensembl | MGI Sequence Detail 643 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory