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Gm5424 Pseudogene Detail
Summary
  • Symbol
    Gm5424
  • Name
    predicted gene 5424
  • Feature Type
    pseudogene
  • IDs
    MGI:3643173
    NCBI Gene: 432466
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:61906902-61908141 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 32.33 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643173
 pseudogene Chr10:61906801-61908350 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017290
 protein coding gene Chr10:61460045-61461574 (+)
A/J MGP_AJ_G0017268
 protein coding gene Chr10:59603943-59605537 (+)
AKR/J MGP_AKRJ_G0017228
 protein coding gene Chr10:61156621-61158336 (+)
BALB/cJ MGP_BALBcJ_G0017228
 protein coding gene Chr10:59678988-59680601 (+)
C3H/HeJ MGP_C3HHeJ_G0017051
 protein coding gene Chr10:61070422-61072385 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017686
 protein coding gene Chr10:63664708-63670251 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019021
 protein coding gene Chr14:18498396-18499702 (-)
CAST/EiJ MGP_CASTEiJ_G0016622
 protein coding gene Chr10:61090083-61093158 (+)
CBA/J MGP_CBAJ_G0017023
 protein coding gene Chr10:66043206-66048409 (+)
DBA/2J MGP_DBA2J_G0017128
 protein coding gene Chr10:58876136-58877730 (+)
FVB/NJ MGP_FVBNJ_G0017122
 protein coding gene Chr10:58134168-58137956 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0017150
 protein coding gene Chr10:68303471-68307264 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017724
 protein coding gene Chr10:60985274-60986802 (+)
PWK/PhJ MGP_PWKPhJ_G0016405
 protein coding gene Chr10:58732791-58734497 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0016686
 protein coding gene Chr10:60907667-60909382 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046687 Ensembl Gene Model | MGI Sequence Detail 1240 C57BL/6J ±  kb
transcript ENSMUST00000053865 Ensembl | MGI Sequence Detail 1240 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 12
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:197464 Lagarrigue S, et al., Limited RNA editing in exons of mouse liver and adipose. Genetics. 2013 Apr;193(4):1107-15
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory