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Vma21-ps Pseudogene Detail
Summary
  • Symbol
    Vma21-ps
  • Name
    VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene
Location &
Maps
more
  • Sequence Map
    Chr4:52496939-52497244 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 28.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643145
 pseudogene Chr4:52494952-52497319 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0028251
 protein coding gene Chr4:49125348-49125653 (-)
AKR/J MGP_AKRJ_G0028200
 protein coding gene Chr4:50468857-50469162 (-)
BALB/cJ MGP_BALBcJ_G0028270
 protein coding gene Chr4:49301868-49302173 (-)
C3H/HeJ MGP_C3HHeJ_G0027991
 protein coding gene Chr4:51020754-51021178 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036462
 protein coding gene ChrX:101139098-101139403 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035080
 protein coding gene ChrX:115249324-115249619 (+)
CBA/J MGP_CBAJ_G0035766
 protein coding gene ChrX:142589523-142589818 (+)
DBA/2J MGP_DBA2J_G0035923
 protein coding gene ChrX:133115095-133115390 (+)
FVB/NJ MGP_FVBNJ_G0035709
 protein coding gene ChrX:96803697-96804128 (-)
LP/J MGP_LPJ_G0035861
 protein coding gene ChrX:99171085-99171517 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035894
 protein coding gene ChrX:149889763-149890058 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028747
 protein coding gene Chr4:50705949-50706254 (-)
PWK/PhJ MGP_PWKPhJ_G0034773
 protein coding gene ChrX:112267297-112267592 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034600
 protein coding gene ChrX:115852115-115852409 (+)
WSB/EiJ MGP_WSBEiJ_G0035215
 protein coding gene ChrX:132123943-132124238 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061619 Ensembl Gene Model | MGI Sequence Detail 306 C57BL/6J ±  kb
transcript ENSMUST00000114578 Ensembl | MGI Sequence Detail 306 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory