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Rpl36a-ps1 Pseudogene Detail
Summary
  • Symbol
    Rpl36a-ps1
  • Name
    ribosomal protein L36A, pseudogene 1
  • Synonyms
    Gm10077
  • Feature Type
    pseudogene
  • IDs
    MGI:3642585
    NCBI Gene: 100043787
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:99231306-99231754 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 49.19 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642585
 pseudogene Chr14:99231306-99231785 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011142
 pseudogene Chr14:95258565-95258885 (-)
A/J MGP_AJ_G0011135
 pseudogene Chr14:92226356-92227281 (-)
AKR/J MGP_AKRJ_G0011095
 pseudogene Chr14:94928041-94928361 (-)
BALB/cJ MGP_BALBcJ_G0011106
 pseudogene Chr14:92554633-92554953 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0011398
 pseudogene Chr14:99151248-99151568 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0010983
 pseudogene Chr14:102820064-102820384 (-)
DBA/2J MGP_DBA2J_G0011029
 pseudogene Chr14:91721053-91721373 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0011120
 pseudogene Chr14:96067317-96067637 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0011376
 pseudogene Chr14:94437255-94437575 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0013354
 pseudogene Chr7:10790582-10790903 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    15
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060377 Ensembl Gene Model | MGI Sequence Detail 449 C57BL/6J ±  kb
transcript ENSMUST00000081987 Ensembl | MGI Sequence Detail 449 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:161428 Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas, Annotation inferences using phylogenetic trees. 2010;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory