C130032M10Rik MGI Mouse Gene Detail - MGI:3642482

Sequence Map

Chr9:114344765-114345669 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642482	lncRNA gene	Chr9:114344765-114345669 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0035390	protein coding gene	Chr9:116949638-116950365 (+)
A/J	MGP_AJ_G0035370	protein coding gene	Chr9:112673399-112674126 (+)
AKR/J	MGP_AKRJ_G0035303	protein coding gene	Chr9:115534254-115534981 (+)
BALB/cJ	MGP_BALBcJ_G0035366	protein coding gene	Chr9:112472203-112472930 (+)
C3H/HeJ	MGP_C3HHeJ_G0035074	protein coding gene	Chr9:116045486-116046213 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035889	protein coding gene	Chr9:120151005-120151732 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032772	protein coding gene	Chr9:109973538-109974269 (+)
CAST/EiJ	MGP_CASTEiJ_G0034379	protein coding gene	Chr9:115888103-115888831 (+)
CBA/J	MGP_CBAJ_G0035041	protein coding gene	Chr9:124640681-124641408 (+)
DBA/2J	MGP_DBA2J_G0035200	protein coding gene	Chr9:112152953-112153680 (+)
FVB/NJ	MGP_FVBNJ_G0035147	protein coding gene	Chr9:110964226-110964953 (+)
LP/J	MGP_LPJ_G0035279	protein coding gene	Chr9:117297234-117297961 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035188	protein coding gene	Chr9:125883911-125884638 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035908	protein coding gene	Chr9:115908483-115909210 (+)
PWK/PhJ	MGP_PWKPhJ_G0034085	protein coding gene	Chr9:112449556-112450283 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0033919	protein coding gene	Chr9:115958811-115959538 (+)
WSB/EiJ	MGP_WSBEiJ_G0034499	protein coding gene	Chr9:115786185-115786912 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000097821	Ensembl Gene Model \| MGI Sequence Detail	905	C57BL/6J	± kb
transcript	ENSMUST00000238379	Ensembl \| MGI Sequence Detail	905	Not Applicable
polypeptide	Q8C888	UniProt \| EBI \| MGI Sequence Detail	123	Not Applicable

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Summaries

All 8
Earliest

J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
Latest

J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;

TSS for C130032M10Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr87567	Chr9:114344781-114344818 (+)	35 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/23/2024 MGI 6.23