About   Help   FAQ
Gm10649 Gene Detail
Summary
  • Symbol
    Gm10649
  • Name
    predicted gene 10649
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642042
    NCBI Gene: 102640923
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:77475715-77627249 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 36.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    763 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642042
 lncRNA gene Chr8:77331854-77627249 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015717
 unclassified non-coding RNA gene Chr8:77134586-77454223 (-)
A/J MGP_AJ_G0015695
 unclassified non-coding RNA gene Chr8:74065576-74363766 (-)
AKR/J MGP_AKRJ_G0015658
 unclassified non-coding RNA gene Chr8:76297878-76593530 (-)
BALB/cJ MGP_BALBcJ_G0015656
 unclassified non-coding RNA gene Chr8:74143059-74463345 (-)
C3H/HeJ MGP_C3HHeJ_G0015478
 unclassified non-coding RNA gene Chr8:76896431-77200622 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016111
 unclassified non-coding RNA gene Chr8:80084710-80429010 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013839
 unclassified non-coding RNA gene Chr8:68326197-68467222 (-)
CAST/EiJ MGP_CASTEiJ_G0015033
 unclassified non-coding RNA gene Chr8:76173483-76505972 (-)
CBA/J MGP_CBAJ_G0015459
 unclassified non-coding RNA gene Chr8:82907282-83243402 (-)
DBA/2J MGP_DBA2J_G0015555
 unclassified non-coding RNA gene Chr8:73776868-74073272 (-)
FVB/NJ MGP_FVBNJ_G0015561
 unclassified non-coding RNA gene Chr8:72778739-73074337 (-)
LP/J MGP_LPJ_G0015635
 unclassified non-coding RNA gene Chr8:77186022-77499783 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015583
 unclassified non-coding RNA gene Chr8:85599566-85933620 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016153
 unclassified non-coding RNA gene Chr8:76275327-76604000 (-)
PWK/PhJ MGP_PWKPhJ_G0014814
 unclassified non-coding RNA gene Chr8:73141773-73297843 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014603
 unclassified non-coding RNA gene Chr8:75133490-75446236 (-)
WSB/EiJ MGP_WSBEiJ_G0015137
 unclassified non-coding RNA gene Chr8:76602359-76925121 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102640923 NCBI Gene Model | MGI Sequence Detail 151535 C57BL/6J ±  kb
transcript NR_028579 RefSeq | MGI Sequence Detail 1985 C57BL/6  
polypeptide Q3TRA9 UniProt | EBI | MGI Sequence Detail 58 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 9
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory