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Krtap4-1 Gene Detail
Summary
  • Symbol
    Krtap4-1
  • Name
    keratin associated protein 4-1
  • Synonyms
    A030010K20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3622079
    NCBI Gene: 665891
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99518055-99519065 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 62.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3622079
 protein coding gene Chr11:99518050-99519065 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019106
 protein coding gene Chr11:102309242-102310256 (-)
A/J MGP_AJ_G0019076
 protein coding gene Chr11:98003613-98004627 (-)
AKR/J MGP_AKRJ_G0019046
 protein coding gene Chr11:101037308-101040019 (-)
BALB/cJ MGP_BALBcJ_G0019048
 protein coding gene Chr11:98508422-98509436 (-)
C3H/HeJ MGP_C3HHeJ_G0018862
 protein coding gene Chr11:101197261-101198275 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019498
 protein coding gene Chr11:105446340-105447354 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017133
 protein coding gene Chr11:95556234-95557226 (-)
CAST/EiJ MGP_CASTEiJ_G0018418
 protein coding gene Chr11:102191298-102193194 (-)
CBA/J MGP_CBAJ_G0018835
 protein coding gene Chr11:109840959-109841973 (-)
DBA/2J MGP_DBA2J_G0018941
 protein coding gene Chr11:97575016-97576030 (-)
FVB/NJ MGP_FVBNJ_G0018932
 protein coding gene Chr11:97072509-97073879 (-)
LP/J MGP_LPJ_G0019012
 protein coding gene Chr11:102805694-102806708 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018959
 protein coding gene Chr11:109503664-109504708 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019540
 protein coding gene Chr11:101407160-101408292 (-)
PWK/PhJ MGP_PWKPhJ_G0018187
 protein coding gene Chr11:98640984-98642323 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017976
 protein coding gene Chr11:101160946-101161960 (-)
WSB/EiJ MGP_WSBEiJ_G0018467
 protein coding gene Chr11:101371518-101374558 (-)



Homology
more
  • Human Ortholog
    KRTAP4-4, keratin associated protein 4-4
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP4-4, keratin associated protein 4-4
  • Synonyms
    KAP4.13, KAP4.4, KRTAP4-13, KRTAP4.13, KRTAP4.4
  • Links
    NCBI Gene ID: 84616
    neXtProt AC: NX_Q9BYR3
    UniProt: Q9BYR3

  • Chr Location
    17q21.2; chr17:41159649-41160748 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 665891 NCBI Gene Model | MGI Sequence Detail 1011 C57BL/6J ±  kb
transcript NM_001048196 RefSeq | MGI Sequence Detail 1011 C57BL/6  
polypeptide NP_001041661 RefSeq | MGI Sequence Detail 169 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002494 Keratin-associated protein
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:230728 Kumar V, et al., A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. J Cell Biol. 2015 Dec 7;211(5):1057-75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory