About   Help   FAQ
Krtap4-1 Gene Detail
Summary
  • Symbol
    Krtap4-1
  • Name
    keratin associated protein 4-1
  • Synonyms
    A030010K20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3622079
    NCBI Gene: 665891
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99518055-99519065 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 62.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3622079
 protein coding gene Chr11:99518050-99519065 (-)
129S1/SvImJ ENSMUSG00200051007
 protein coding gene Chr11:96779889-96780903 (-)
A/J ENSMUSG00195047776
 protein coding gene Chr11:96488591-96489605 (-)
AKR/J ENSMUSG00220049779
 protein coding gene Chr11:96745385-96746399 (-)
BALB/cJ ENSMUSG00180044658
 protein coding gene Chr11:96775907-96776921 (-)
C3H/HeJ ENSMUSG00175050415
 protein coding gene Chr11:96753432-96754446 (-)
C57BL/6NJ ENSMUSG00215053910
 protein coding gene Chr11:96336799-96337813 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017133
 protein coding gene Chr11:95556234-95557226 (-)
CAST/EiJ ENSTCUG00005047213
 protein coding gene Chr11:96275099-96276113 (-)
CBA/J ENSMUSG00210051608
 protein coding gene Chr11:96461648-96462662 (-)
DBA/2J ENSMUSG00185051130
 protein coding gene Chr11:96803325-96804339 (-)
FVB/NJ ENSMUSG00205027870
 protein coding gene Chr11:96669182-96670196 (-)
JF1/MsJ ENSUMUG00000052063
 protein coding gene Chr11:97096400-97097414 (-)
LP/J ENSMUSG00230050709
 protein coding gene Chr11:97856142-97857156 (-)
NOD/ShiLtJ ENSMUSG00190038661
 protein coding gene Chr11:96838225-96839239 (-)
NZO/HlLtJ ENSMUSG00225050030
 protein coding gene Chr11:99916529-99917543 (-)
PWK/PhJ ENSLUMG00010041234
 protein coding gene Chr11:96654218-96655232 (-)
SPRET/EiJ ENSMSPG00010045747
 protein coding gene Chr11:97191244-97192258 (-)
WSB/EiJ ENSIUOG00005044085
 protein coding gene Chr11:96613556-96614570 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 665891 NCBI Gene Model | MGI Sequence Detail 1011 C57BL/6J ±  kb
transcript NM_001048196 RefSeq | MGI Sequence Detail 1011 C57BL/6  
polypeptide NP_001041661 RefSeq | MGI Sequence Detail 169 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR002494 Keratin-associated protein
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:357457 Kumar V, et al., Keratin-dependent thymic stromal lymphopoietin expression suggests a link between skin blistering and atopic disease. J Allergy Clin Immunol. 2016;138(5):1461-1464
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory