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Mir31 Gene Detail
Summary
  • Symbol
    Mir31
  • Name
    microRNA 31
  • Synonyms
    mir 31, miR-31, Mirn31, mmu-mir-31
  • Feature Type
    miRNA gene
  • IDs
    MGI:3619330
    NCBI Gene: 723895
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:88828794-88828899 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 42.05 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3619330
 miRNA gene Chr4:88828794-88828899 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008736
 miRNA gene Chr4:88819086-88819191 (-)
A/J MGP_AJ_G0008720
 miRNA gene Chr4:85716815-85716920 (-)
AKR/J MGP_AKRJ_G0008712
 miRNA gene Chr4:87834138-87834243 (-)
BALB/cJ MGP_BALBcJ_G0008710
 miRNA gene Chr4:85947148-85947253 (-)
C3H/HeJ MGP_C3HHeJ_G0008651
 miRNA gene Chr4:88563203-88563308 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008929
 miRNA gene Chr4:92206555-92206660 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007877
 miRNA gene Chr4:81663054-81663159 (-)
CAST/EiJ MGP_CASTEiJ_G0008492
 miRNA gene Chr4:86405520-86405625 (-)
CBA/J MGP_CBAJ_G0008616
 miRNA gene Chr4:95053894-95053999 (-)
DBA/2J MGP_DBA2J_G0008646
 miRNA gene Chr4:85475442-85475547 (-)
FVB/NJ MGP_FVBNJ_G0008668
 miRNA gene Chr4:84414662-84414767 (-)
LP/J MGP_LPJ_G0008741
 miRNA gene Chr4:89112871-89112976 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008633
 miRNA gene Chr4:100046433-100046538 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008910
 miRNA gene Chr4:87980133-87980238 (-)
PWK/PhJ MGP_PWKPhJ_G0008421
 miRNA gene Chr4:83764001-83764106 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008273
 miRNA gene Chr4:85495827-85495932 (-)
WSB/EiJ MGP_WSBEiJ_G0008589
 miRNA gene Chr4:88185446-88185551 (-)



Homology
more
  • Human Ortholog
    MIR31, microRNA 31
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR31, microRNA 31
  • Synonyms
    hsa-mir-31, miR-31, MIRN31
  • Links
    NCBI Gene ID: 407035

  • Chr Location
    chr9:21512115-21512185 (-)  GRCh38
Human Diseases
more
  • Diseases
    2 with human MIR31 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotypes from 3 alleles in 3 genetic backgrounds
    4 phenotypes from multigenic genotypes
    17 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for knock-out allele exhibit hypolactation and abnormalities in mammary gland development including a reduction of mammary stem cells, impaired cell proliferation, and precocious differentiation of the alveolar epithelium followed by subsequent defect in alveolar development.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    749
  • Tissues
    30
  • Literature Summary
    9
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      23
    • RefSeq
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 723895 NCBI Gene Model | MGI Sequence Detail 106 C57BL/6J ±  kb
    transcript NR_029747 RefSeq | MGI Sequence Detail 106 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 6
      Primer pair 2
      Other 4
    Other Database
    Links
    less
    miRBase MI0000579
    References
    more
    • Summaries
      All 52
      Developmental Gene Expression 9
      Gene Ontology 5
      Phenotypes 17
    • Earliest
      J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory