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Mir10a Gene Detail
Summary
  • Symbol
    Mir10a
  • Name
    microRNA 10a
  • Synonyms
    MicroRNA-10a, mir 10a, miR-10a, Mirn10a, mmu-mir-10a
Location &
Maps
more
  • Sequence Map
    Chr11:96207991-96208100 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 59.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3619064
 miRNA gene Chr11:96207991-96208100 (+)
129S1/SvImJ ENSMUSG00200053062
 miRNA gene Chr11:93452366-93452475 (+)
A/J ENSMUSG00195052346
 miRNA gene Chr11:93173859-93173968 (+)
AKR/J ENSMUSG00220051677
 miRNA gene Chr11:93432952-93433061 (+)
BALB/cJ ENSMUSG00180052444
 miRNA gene Chr11:93437266-93437375 (+)
C3H/HeJ ENSMUSG00175051836
 miRNA gene Chr11:93433078-93433187 (+)
C57BL/6NJ ENSMUSG00215054487
 miRNA gene Chr11:93025528-93025637 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007156
 miRNA gene Chr11:92088338-92088447 (+)
CAST/EiJ ENSTCUG00005050708
 miRNA gene Chr11:92876294-92876403 (+)
CBA/J ENSMUSG00210053391
 miRNA gene Chr11:93136332-93136441 (+)
DBA/2J ENSMUSG00185052079
 miRNA gene Chr11:93482914-93483023 (+)
FVB/NJ ENSMUSG00205049541
 miRNA gene Chr11:93339432-93339541 (+)
JF1/MsJ ENSUMUG00000056378
 miRNA gene Chr11:93788992-93789101 (+)
LP/J ENSMUSG00230050901
 miRNA gene Chr11:94535449-94535558 (+)
NOD/ShiLtJ ENSMUSG00190052941
 miRNA gene Chr11:93530913-93531022 (+)
NZO/HlLtJ ENSMUSG00225052418
 miRNA gene Chr11:96591217-96591326 (+)
PWK/PhJ ENSLUMG00010051351
 miRNA gene Chr11:93334055-93334164 (+)
SPRET/EiJ ENSMSPG00010050999
 miRNA gene Chr11:93836135-93836244 (+)
WSB/EiJ ENSIUOG00005051396
 miRNA gene Chr11:93278623-93278732 (+)



Homology
more
  • Human Ortholog
    MIR10A, microRNA 10a
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR10A, microRNA 10a
  • Synonyms
    hsa-mir-10a, mir-10a, MIRN10A, miRNA10A
  • Links
    NCBI Gene ID: 406902

  • Chr Location
    chr17:48579838-48579947 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    3 phenotypes from multigenic genotypes
    1 images
    21 phenotype references
Mice homozygous for a targeted deletion are viable with no observed pathologies. Mice homozygous for a knock-out allele exhibit increased frequency with of high-grade dysplasia and higher incidence of tubule-villous adenomas in Apcmin heterozygotes.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    7
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    609
  • Tissues
    10
  • Literature Summary
    11
Sequences &
Gene Models
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  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 723893 NCBI Gene Model | MGI Sequence Detail 110 C57BL/6J ±  kb
transcript NR_029784 RefSeq | MGI Sequence Detail 110 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Primer pair 1
    Other 3
Other Database
Links
less
miRBase MI0000685
References
more
  • Summaries
    All 55
    Developmental Gene Expression 11
    Gene Ontology 6
    Phenotypes 21
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:384918 Yang W, et al., Deficiency of microRNA-10a in CD4+ T cells protects against intestinal infection through mitochondrial oxidation-IL-22 pathway. J Immunol. 2026 Apr 15;215(4)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory