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Lsmem2 Gene Detail
Summary
  • Symbol
    Lsmem2
  • Name
    leucine-rich single-pass membrane protein 2
  • Synonyms
    BY080835
  • Feature Type
    protein coding gene
  • IDs
    MGI:3612240
    NCBI Gene: 434436
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:107469829-107474274 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 58.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3612240
 protein coding gene Chr9:107469825-107475189 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007505
 lincRNA gene Chr9:109478687-109484279 (-)
A/J MGP_AJ_G0007500
 lincRNA gene Chr9:105491528-105494962 (-)
AKR/J MGP_AKRJ_G0007472
 lincRNA gene Chr9:108124512-108127905 (-)
BALB/cJ MGP_BALBcJ_G0007477
 lincRNA gene Chr9:105160227-105163506 (-)
C3H/HeJ MGP_C3HHeJ_G0007422
 lincRNA gene Chr9:108522641-108525992 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007649
 lincRNA gene Chr9:112460787-112464740 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006830
 lincRNA gene Chr9:102920207-102923437 (-)
CAST/EiJ MGP_CASTEiJ_G0007325
 lincRNA gene Chr9:108456556-108459814 (-)
CBA/J MGP_CBAJ_G0007403
 lincRNA gene Chr9:116434552-116437786 (-)
DBA/2J MGP_DBA2J_G0007429
 lincRNA gene Chr9:104944510-104947744 (-)
FVB/NJ MGP_FVBNJ_G0007445
 lincRNA gene Chr9:103710935-103714325 (-)
LP/J MGP_LPJ_G0007509
 lincRNA gene Chr9:109676479-109679552 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007426
 lincRNA gene Chr9:118049069-118053373 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007654
 lincRNA gene Chr9:108398517-108401875 (-)
PWK/PhJ MGP_PWKPhJ_G0007266
 lincRNA gene Chr9:105265228-105268512 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007170
 lincRNA gene Chr9:108450095-108453384 (-)
WSB/EiJ MGP_WSBEiJ_G0007385
 lincRNA gene Chr9:108278381-108281621 (-)



Homology
more
  • Human Ortholog
    LSMEM2, leucine rich single-pass membrane protein 2
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LSMEM2, leucine rich single-pass membrane protein 2
  • Synonyms
    C3orf45
  • Links
    NCBI Gene ID: 132228
    neXtProt AC: NX_Q8N112
    UniProt: Q8N112

  • Chr Location
    chr3:50277907-50288114 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103409 Ensembl Gene Model | MGI Sequence Detail 4446 C57BL/6J ±  kb
transcript ENSMUST00000238519 Ensembl | MGI Sequence Detail 1424 Not Applicable  
polypeptide ENSMUSP00000158647 Ensembl | MGI Sequence Detail 150 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031674 Protein of unknown function DUF4714
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory