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1700120B22Rik Gene Detail
Summary
  • Symbol
    1700120B22Rik
  • Name
    RIKEN cDNA 1700120B22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3604190
    NCBI Gene: 641387
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:63078847-63079932 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 32.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3604190
 lncRNA gene Chr10:63078010-63079932 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002862
 antisense lncRNA gene Chr10:62754406-62755491 (-)
A/J MGP_AJ_G0002839
 antisense lncRNA gene Chr10:60791757-60792842 (-)
AKR/J MGP_AKRJ_G0002819
 antisense lncRNA gene Chr10:62400518-62401603 (-)
BALB/cJ MGP_BALBcJ_G0002826
 antisense lncRNA gene Chr10:60904814-60905899 (-)
C3H/HeJ MGP_C3HHeJ_G0002783
 antisense lncRNA gene Chr10:62319049-62320134 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002969
 antisense lncRNA gene Chr10:65007030-65008115 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002512
 antisense lncRNA gene Chr10:57722449-57723557 (-)
CAST/EiJ MGP_CASTEiJ_G0002755
 antisense lncRNA gene Chr10:62381865-62382940 (-)
CBA/J MGP_CBAJ_G0002778
 antisense lncRNA gene Chr10:67480375-67481460 (-)
DBA/2J MGP_DBA2J_G0002785
 antisense lncRNA gene Chr10:60062370-60063455 (-)
FVB/NJ MGP_FVBNJ_G0002805
 antisense lncRNA gene Chr10:59336321-59337406 (-)
LP/J MGP_LPJ_G0002861
 antisense lncRNA gene Chr10:63159469-63160549 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002795
 antisense lncRNA gene Chr10:69622878-69623963 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002972
 antisense lncRNA gene Chr10:62240926-62242011 (-)
PWK/PhJ MGP_PWKPhJ_G0002713
 antisense lncRNA gene Chr10:59949653-59950777 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002663
 antisense lncRNA gene Chr10:61583492-61584577 (-)
WSB/EiJ MGP_WSBEiJ_G0002784
 antisense lncRNA gene Chr10:62196325-62197396 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700120B22Rik
  • Find Mice (IMSR)
    4 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045391 Ensembl Gene Model | MGI Sequence Detail 1086 C57BL/6J ±  kb
transcript ENSMUST00000054837 Ensembl | MGI Sequence Detail 464 Not Applicable  
polypeptide Q9CR85 UniProt | EBI | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory