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Kctd18 Gene Detail
Summary
  • Symbol
    Kctd18
  • Name
    potassium channel tetramerisation domain containing 18
  • Synonyms
    4932411A20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3603813
    NCBI Gene: 51960
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:57994260-58009298 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 28.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    103 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3603813
 protein coding gene Chr1:57994260-58058115 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016043
 protein coding gene Chr1:57787711-57852411 (-)
A/J MGP_AJ_G0016026
 protein coding gene Chr1:55777223-55840790 (-)
AKR/J MGP_AKRJ_G0015982
 protein coding gene Chr1:57280975-57344415 (-)
BALB/cJ MGP_BALBcJ_G0015981
 protein coding gene Chr1:55810284-55874860 (-)
C3H/HeJ MGP_C3HHeJ_G0015813
 protein coding gene Chr1:57552993-57617175 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016434
 protein coding gene Chr1:60154962-60218955 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014155
 protein coding gene Chr1:51720055-51782592 (-)
CAST/EiJ MGP_CASTEiJ_G0015395
 protein coding gene Chr1:56812037-56876076 (-)
CBA/J MGP_CBAJ_G0015785
 protein coding gene Chr1:61900893-61968423 (-)
DBA/2J MGP_DBA2J_G0015886
 protein coding gene Chr1:55184695-55247664 (-)
FVB/NJ MGP_FVBNJ_G0015888
 protein coding gene Chr1:54518547-54582599 (-)
LP/J MGP_LPJ_G0015958
 protein coding gene Chr1:58679774-58747623 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015908
 protein coding gene Chr1:64918581-64986636 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016481
 protein coding gene Chr1:57262591-57330165 (-)
PWK/PhJ MGP_PWKPhJ_G0015181
 protein coding gene Chr1:54555415-54618172 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014962
 protein coding gene Chr1:56839356-56906901 (-)
WSB/EiJ MGP_WSBEiJ_G0015458
 protein coding gene Chr1:56940190-57002802 (-)



Homology
more
  • Human Ortholog
    KCTD18, potassium channel tetramerization domain containing 18
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KCTD18, potassium channel tetramerization domain containing 18
  • Synonyms
    6530404F10Rik
  • Links
    NCBI Gene ID: 130535
    neXtProt AC: NX_Q6PI47
    UniProt: Q6PI47

  • Chr Location
    2q33.1; chr2:200488958-200519784 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    748
  • Tissues
    28
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 51960 NCBI Gene Model | MGI Sequence Detail 15039 C57BL/6J ±  kb
transcript NM_001428731 RefSeq | MGI Sequence Detail 3252 C57BL/6  
polypeptide NP_001415658 RefSeq | MGI Sequence Detail 417 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR045704 BTB/POZ domain-containing protein KCTD18, C-terminal domain
    IPR003131 Potassium channel tetramerisation-type BTB domain
    IPR011333 SKP1/BTB/POZ domain superfamily
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14
Other
Accession IDs
less
MGI:1926148
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory