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9230009I02Rik Gene Detail
Summary
  • Symbol
    9230009I02Rik
  • Name
    RIKEN cDNA 9230009I02 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3588229
    NCBI Gene: 619293
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:50975914-50982660 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 30.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588229
 lncRNA gene Chr11:50975914-50982662 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005224
 lincRNA gene Chr11:50291476-50302018 (+)
A/J MGP_AJ_G0005209
 lincRNA gene Chr11:48398118-48405037 (+)
AKR/J MGP_AKRJ_G0005187
 lincRNA gene Chr11:49916292-49922991 (+)
BALB/cJ MGP_BALBcJ_G0005189
 lincRNA gene Chr11:48688517-48698315 (+)
C3H/HeJ MGP_C3HHeJ_G0005138
 lincRNA gene Chr11:49934908-49947762 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005341
 lincRNA gene Chr11:51822018-51828781 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004736
 lincRNA gene Chr11:45990180-45996552 (+)
CAST/EiJ MGP_CASTEiJ_G0005085
 lincRNA gene Chr11:49937287-49947739 (+)
CBA/J MGP_CBAJ_G0005128
 lincRNA gene Chr11:54235355-54244832 (+)
DBA/2J MGP_DBA2J_G0005145
 lincRNA gene Chr11:48129647-48136168 (+)
FVB/NJ MGP_FVBNJ_G0005170
 lincRNA gene Chr11:47816617-47823778 (+)
LP/J MGP_LPJ_G0005226
 lincRNA gene Chr11:50687503-50698302 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005153
 lincRNA gene Chr11:55671060-55678522 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005344
 lincRNA gene Chr11:50025762-50026981 (+)
PWK/PhJ MGP_PWKPhJ_G0005036
 lincRNA gene Chr11:48568611-48579276 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004958
 lincRNA gene Chr11:49725434-49735612 (+)
WSB/EiJ MGP_WSBEiJ_G0005133
 lincRNA gene Chr11:49678220-49688151 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072982 Ensembl Gene Model | MGI Sequence Detail 6747 C57BL/6J ±  kb
transcript ENSMUST00000101255 Ensembl | MGI Sequence Detail 1148 Not Applicable  
polypeptide Q3UW44 UniProt | EBI | MGI Sequence Detail 168 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory