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Cdh19 Gene Detail
Summary
  • Symbol
    Cdh19
  • Name
    cadherin 19, type 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588198
    NCBI Gene: 227485
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:110816056-110905314 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, 50.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    465 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588198
protein coding gene Chr1:110811802-110905331 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016386
protein coding gene Chr1:113176078-113279369 (-)
A/J MGP_AJ_G0016366
protein coding gene Chr1:109204531-109289135 (-)
AKR/J MGP_AKRJ_G0016330
protein coding gene Chr1:112295511-112384016 (-)
BALB/cJ MGP_BALBcJ_G0016326
protein coding gene Chr1:109359253-109453715 (-)
C3H/HeJ MGP_C3HHeJ_G0016153
protein coding gene Chr1:112713123-112808810 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016785
protein coding gene Chr1:117533887-117636479 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014503
protein coding gene Chr1:103157403-103231442 (-)
CAST/EiJ MGP_CASTEiJ_G0015736
protein coding gene Chr1:111640424-111738464 (-)
CBA/J MGP_CBAJ_G0016125
protein coding gene Chr1:121547218-121646824 (-)
DBA/2J MGP_DBA2J_G0016232
protein coding gene Chr1:108294936-108385161 (-)
FVB/NJ MGP_FVBNJ_G0016231
protein coding gene Chr1:107153481-107249491 (-)
LP/J MGP_LPJ_G0016305
protein coding gene Chr1:114537473-114626498 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016258
protein coding gene Chr1:126848712-126975931 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016823
protein coding gene Chr1:112287854-112395471 (-)
PWK/PhJ MGP_PWKPhJ_G0015521
protein coding gene Chr1:107332169-107424863 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015309
protein coding gene Chr1:110888737-110988728 (-)
WSB/EiJ MGP_WSBEiJ_G0015798
protein coding gene Chr1:112134870-112229105 (-)



Homology
more
  • Human Ortholog
    CDH19, cadherin 19
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDH19, cadherin 19
  • Synonyms
    CDH7, CDH7L2
  • Links
    NCBI Gene ID: 28513
    neXtProt AC: NX_Q9H159
    UniProt: Q9H159

  • Chr Location
    18q22.1; chr18:66501083-66604138 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047216 Ensembl Gene Model | MGI Sequence Detail 89259 C57BL/6J ±  kb
transcript ENSMUST00000094626 Ensembl | MGI Sequence Detail 3914 Not Applicable  
polypeptide ENSMUSP00000092210 Ensembl | MGI Sequence Detail 770 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 10
    Primer pair 4
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 31
    Developmental Gene Expression 6
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:333013 Huang T, et al., Direct Interaction of Sox10 With Cadherin-19 Mediates Early Sacral Neural Crest Cell Migration: Implications for Enteric Nervous System Development Defects. Gastroenterology. 2022 Jan;162(1):179-192.e11

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory