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AY074887 Gene Detail
Summary
  • Symbol
    AY074887
  • Name
    cDNA sequence AY074887
  • Synonyms
    cleft palate-related protein 1, Mcpr1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3575512
    NCBI Gene: 246735
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:54857528-54858238 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 9, 29.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3575512
protein coding gene Chr9:54857514-54858282 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034833
protein coding gene Chr9:54019034-54019781 (-)
A/J MGP_AJ_G0034814
protein coding gene Chr9:52289358-52290116 (-)
AKR/J MGP_AKRJ_G0034743
protein coding gene Chr9:53480572-53481298 (-)
BALB/cJ MGP_BALBcJ_G0034806
protein coding gene Chr9:52068887-52069664 (-)
C3H/HeJ MGP_C3HHeJ_G0034516
protein coding gene Chr9:53946827-53947579 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035325
protein coding gene Chr9:55521452-55523451 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032237
protein coding gene Chr9:51704958-51705699 (-)
CAST/EiJ MGP_CASTEiJ_G0033838
protein coding gene Chr9:53963918-53964665 (-)
CBA/J MGP_CBAJ_G0034487
protein coding gene Chr9:57459034-57459780 (-)
DBA/2J MGP_DBA2J_G0034646
protein coding gene Chr9:52183543-52184269 (-)
FVB/NJ MGP_FVBNJ_G0034588
protein coding gene Chr9:51386520-51387293 (-)
LP/J MGP_LPJ_G0034729
protein coding gene Chr9:54330327-54331118 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034631
protein coding gene Chr9:58981746-58982502 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035347
protein coding gene Chr9:53502759-53503541 (-)
PWK/PhJ MGP_PWKPhJ_G0033542
protein coding gene Chr9:52162573-52163327 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033377
protein coding gene Chr9:53759405-53760158 (-)
WSB/EiJ MGP_WSBEiJ_G0033950
protein coding gene Chr9:53462216-53462963 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 246735 NCBI Gene Model | MGI Sequence Detail 711 C57BL/6J ±  kb
transcript NM_145229 RefSeq | MGI Sequence Detail 711 Not Specified  
polypeptide NP_660264 RefSeq | MGI Sequence Detail 132 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 9
    Genomic 1
    cDNA 7
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:83857 Xuan DY, et al., Identification and characterization of a novel gene, Mcpr1, and its possible function in the proliferation of embryonic palatal mesenchymal cells. J Biol Chem. 2006;281(45):33997-34008
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory