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Or1e1d-ps1 Pseudogene Detail
Summary
  • Symbol
    Or1e1d-ps1
  • Name
    olfactory receptor family 1 subfamily E member 1D, pseudogene 1
  • Synonyms
    GA_x6K02T2P1NL-4083149-4084087, MOR135-19, Olfr396-ps1
Location &
Maps
more
  • Sequence Map
    Chr11:73818833-73819768 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 45.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030230
 polymorphic pseudogene Chr11:73815828-73820394 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009931
 polymorphic pseudogene Chr11:74616446-74620390 (+)
A/J MGP_AJ_G0009916
 polymorphic pseudogene Chr11:71845268-71849252 (+)
AKR/J MGP_AKRJ_G0009900
 polymorphic pseudogene Chr11:74003425-74007369 (+)
BALB/cJ MGP_BALBcJ_G0009901
 polymorphic pseudogene Chr11:72125882-72130306 (+)
C3H/HeJ MGP_C3HHeJ_G0009833
 polymorphic pseudogene Chr11:74003293-74007237 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010146
 polymorphic pseudogene Chr11:76920819-76924762 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008945
 polymorphic pseudogene Chr11:68866988-68941140 (+)
CAST/EiJ MGP_CASTEiJ_G0009650
 polymorphic pseudogene Chr11:74385386-74390420 (+)
CBA/J MGP_CBAJ_G0009807
 polymorphic pseudogene Chr11:80278018-80281962 (+)
DBA/2J MGP_DBA2J_G0009834
 polymorphic pseudogene Chr11:71440105-71443948 (+)
FVB/NJ MGP_FVBNJ_G0009851
 polymorphic pseudogene Chr11:70991125-70995068 (+)
LP/J MGP_LPJ_G0009928
 polymorphic pseudogene Chr11:75129993-75133937 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009817
 polymorphic pseudogene Chr11:80836509-80841466 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010119
 polymorphic pseudogene Chr11:74222194-74226178 (+)
PWK/PhJ MGP_PWKPhJ_G0009573
 polymorphic pseudogene Chr11:72130750-72134742 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009406
 polymorphic pseudogene Chr11:73803162-73807132 (+)
WSB/EiJ MGP_WSBEiJ_G0009754
 polymorphic pseudogene Chr11:73988683-73993261 (+)



Homology
more
  • Human Ortholog
    OR1E1, olfactory receptor family 1 subfamily E member 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR1E1, olfactory receptor family 1 subfamily E member 1
  • Synonyms
    HGM071, OR13-66, OR17-2, OR17-32, OR1E5, OR1E6, OR1E8P, OR1E9P, OST547
  • Links
    NCBI Gene ID: 8387
    neXtProt AC: NX_P30953
    UniProt: P30953

  • Chr Location
    17p13.3; chr17:3397104-3398410 (-)  GRCh38
  • Human Ortholog
    OR1E2, olfactory receptor family 1 subfamily E member 2
  • Synonyms
    OR17-135, OR17-136, OR17-93, OR1E4, OR1E7, OST529
  • Links
    NCBI Gene ID: 8388
    neXtProt AC: NX_P47887
    UniProt: P47887

  • Chr Location
    17p13.2; chr17:3432870-3433841 (-)  GRCh38
  • Human Ortholog
    OR1E3, olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)
  • Synonyms
    OR17-210, OR1E3P
  • Links
    NCBI Gene ID: 8389
    UniProt: Q8WZA6

  • Chr Location
    17p13.3; chr17:3116327-3117474 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 258208 NCBI Gene Model | MGI Sequence Detail 936 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory