About   Help   FAQ
Ccdc102a Gene Detail
Summary
  • Symbol
    Ccdc102a
  • Name
    coiled-coil domain containing 102A
  • Synonyms
    LOC234582
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686927
    NCBI Gene: 234582
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:95629497-95644726 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 8, 46.99 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686927
protein coding gene Chr8:95629497-95644726 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033974
protein coding gene Chr8:96344700-96361791 (-)
A/J MGP_AJ_G0033957
protein coding gene Chr8:92592116-92607339 (-)
AKR/J MGP_AKRJ_G0033883
protein coding gene Chr8:95117624-95132846 (-)
BALB/cJ MGP_BALBcJ_G0033949
protein coding gene Chr8:92673092-92688374 (-)
C3H/HeJ MGP_C3HHeJ_G0033659
protein coding gene Chr8:95830855-95846081 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034470
protein coding gene Chr8:99855762-99872627 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031411
protein coding gene Chr8:86394116-86409421 (-)
CAST/EiJ MGP_CASTEiJ_G0032991
protein coding gene Chr8:95432732-95447948 (-)
CBA/J MGP_CBAJ_G0033635
protein coding gene Chr8:103155381-103170940 (-)
DBA/2J MGP_DBA2J_G0033789
protein coding gene Chr8:92071382-92086606 (-)
FVB/NJ MGP_FVBNJ_G0033736
protein coding gene Chr8:91021884-91037396 (-)
LP/J MGP_LPJ_G0033881
protein coding gene Chr8:96493265-96509370 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033778
protein coding gene Chr8:105441648-105456866 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034488
protein coding gene Chr8:95280840-95296060 (-)
PWK/PhJ MGP_PWKPhJ_G0032693
protein coding gene Chr8:91438884-91454154 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032530
protein coding gene Chr8:94123554-94138760 (-)
WSB/EiJ MGP_WSBEiJ_G0033103
protein coding gene Chr8:95813708-95830735 (-)



Homology
more
  • Human Ortholog
    CCDC102A, coiled-coil domain containing 102A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC102A, coiled-coil domain containing 102A
  • Links
    NCBI Gene ID: 92922
    neXtProt AC: NX_Q96A19
    UniProt: Q96A19

  • Chr Location
    16q21; chr16:57512181-57537016 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 234582 NCBI Gene Model | MGI Sequence Detail 15230 C57BL/6J ±  kb
transcript NM_001033533 RefSeq | MGI Sequence Detail 2309 C57BL/6  
polypeptide Q3TMW1 UniProt | EBI | MGI Sequence Detail 549 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 37
    cDNA 36
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2685432
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/12/2024
MGI 6.23
The Jackson Laboratory